Protein–RNA interactions for Protein: P61079

Ube2d3, Ubiquitin-conjugating enzyme E2 D3, mousemouse

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube2d3P61079 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ube2d3P61079 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Ube2d3P61079 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ube2d3P61079 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ube2d3P61079 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Ube2d3P61079 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ube2d3P61079 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ube2d3P61079 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
Ube2d3P61079 Gm45141-201ENSMUST00000206502 1888 ntBASIC13.57□□□□□ -0.24
Ube2d3P61079 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Ube2d3P61079 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ube2d3P61079 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ube2d3P61079 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC13.56□□□□□ -0.24
Ube2d3P61079 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ube2d3P61079 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Ube2d3P61079 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Ube2d3P61079 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC13.56□□□□□ -0.24
Ube2d3P61079 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ube2d3P61079 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
Ube2d3P61079 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ube2d3P61079 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC13.56□□□□□ -0.24
Ube2d3P61079 Gm9207-201ENSMUST00000198773 1115 ntBASIC13.56□□□□□ -0.24
Ube2d3P61079 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ube2d3P61079 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ube2d3P61079 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Ube2d3P61079 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ube2d3P61079 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ube2d3P61079 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC13.56□□□□□ -0.24
Ube2d3P61079 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
Ube2d3P61079 Gm10209-201ENSMUST00000203397 1607 ntBASIC13.56□□□□□ -0.24
Ube2d3P61079 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ube2d3P61079 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Ube2d3P61079 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC13.56□□□□□ -0.24
Ube2d3P61079 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ube2d3P61079 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ube2d3P61079 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ube2d3P61079 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC13.55□□□□□ -0.24
Ube2d3P61079 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ube2d3P61079 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Ube2d3P61079 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Ube2d3P61079 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC13.55□□□□□ -0.24
Ube2d3P61079 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ube2d3P61079 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Ube2d3P61079 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ube2d3P61079 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ube2d3P61079 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ube2d3P61079 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC13.55□□□□□ -0.24
Ube2d3P61079 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Ube2d3P61079 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ube2d3P61079 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ube2d3P61079 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ube2d3P61079 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Ube2d3P61079 Gm45640-201ENSMUST00000210665 1896 ntBASIC13.55□□□□□ -0.24
Ube2d3P61079 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC13.54□□□□□ -0.24
Ube2d3P61079 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Ube2d3P61079 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Ube2d3P61079 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ube2d3P61079 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Ube2d3P61079 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ube2d3P61079 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Ube2d3P61079 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ube2d3P61079 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ube2d3P61079 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Ube2d3P61079 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Ube2d3P61079 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC13.54□□□□□ -0.24
Ube2d3P61079 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ube2d3P61079 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC13.54□□□□□ -0.24
Ube2d3P61079 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Ube2d3P61079 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Ube2d3P61079 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ube2d3P61079 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Ube2d3P61079 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Ube2d3P61079 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Ube2d3P61079 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC13.54□□□□□ -0.24
Ube2d3P61079 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Ube2d3P61079 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ube2d3P61079 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Ube2d3P61079 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ube2d3P61079 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Ube2d3P61079 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ube2d3P61079 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Ube2d3P61079 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ube2d3P61079 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Ube2d3P61079 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ube2d3P61079 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ube2d3P61079 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC13.53□□□□□ -0.24
Ube2d3P61079 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Ube2d3P61079 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ube2d3P61079 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ube2d3P61079 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ube2d3P61079 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ube2d3P61079 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Ube2d3P61079 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Ube2d3P61079 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC13.53□□□□□ -0.24
Ube2d3P61079 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Ube2d3P61079 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC13.53□□□□□ -0.24
Ube2d3P61079 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC13.53□□□□□ -0.24
Ube2d3P61079 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ube2d3P61079 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC13.53□□□□□ -0.24
Ube2d3P61079 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC13.53□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 17.6 ms