Protein–RNA interactions for Protein: P61025

Cks1b, Cyclin-dependent kinases regulatory subunit 1, mousemouse

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1bP61025 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cks1bP61025 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Cks1bP61025 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Cks1bP61025 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Cks1bP61025 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cks1bP61025 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cks1bP61025 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cks1bP61025 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cks1bP61025 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cks1bP61025 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC13.54□□□□□ -0.24
Cks1bP61025 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cks1bP61025 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cks1bP61025 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cks1bP61025 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cks1bP61025 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cks1bP61025 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cks1bP61025 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cks1bP61025 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Cks1bP61025 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cks1bP61025 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Cks1bP61025 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Cks1bP61025 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cks1bP61025 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cks1bP61025 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cks1bP61025 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cks1bP61025 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cks1bP61025 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cks1bP61025 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Cks1bP61025 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cks1bP61025 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cks1bP61025 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cks1bP61025 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cks1bP61025 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cks1bP61025 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC13.52□□□□□ -0.24
Cks1bP61025 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Cks1bP61025 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
Cks1bP61025 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Cks1bP61025 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC13.52□□□□□ -0.24
Cks1bP61025 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Cks1bP61025 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Cks1bP61025 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Cks1bP61025 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC13.52□□□□□ -0.25
Cks1bP61025 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cks1bP61025 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cks1bP61025 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cks1bP61025 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cks1bP61025 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC13.52□□□□□ -0.25
Cks1bP61025 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cks1bP61025 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cks1bP61025 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cks1bP61025 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cks1bP61025 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cks1bP61025 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cks1bP61025 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cks1bP61025 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cks1bP61025 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Cks1bP61025 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC13.51□□□□□ -0.25
Cks1bP61025 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cks1bP61025 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC13.51□□□□□ -0.25
Cks1bP61025 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Cks1bP61025 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cks1bP61025 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Cks1bP61025 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Cks1bP61025 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cks1bP61025 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cks1bP61025 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Cks1bP61025 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Cks1bP61025 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cks1bP61025 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC13.51□□□□□ -0.25
Cks1bP61025 Gm12366-201ENSMUST00000121722 873 ntBASIC13.51□□□□□ -0.25
Cks1bP61025 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC13.51□□□□□ -0.25
Cks1bP61025 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Cks1bP61025 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC13.51□□□□□ -0.25
Cks1bP61025 Gm5786-201ENSMUST00000085368 882 ntBASIC13.51□□□□□ -0.25
Cks1bP61025 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Cks1bP61025 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC13.51□□□□□ -0.25
Cks1bP61025 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cks1bP61025 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cks1bP61025 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cks1bP61025 Gm37035-201ENSMUST00000194809 2148 ntBASIC13.51□□□□□ -0.25
Cks1bP61025 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cks1bP61025 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cks1bP61025 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cks1bP61025 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cks1bP61025 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cks1bP61025 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC13.5□□□□□ -0.25
Cks1bP61025 Fst-202ENSMUST00000223640 2612 ntBASIC13.5□□□□□ -0.25
Cks1bP61025 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cks1bP61025 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cks1bP61025 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cks1bP61025 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cks1bP61025 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Cks1bP61025 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cks1bP61025 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Cks1bP61025 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC13.5□□□□□ -0.25
Cks1bP61025 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cks1bP61025 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC13.5□□□□□ -0.25
Cks1bP61025 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Cks1bP61025 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cks1bP61025 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms