Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC21.22■□□□□ 0.99
Tpm1P58771 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC21.22■□□□□ 0.99
Tpm1P58771 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Tpm1P58771 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Tpm1P58771 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Tpm1P58771 Gm20100-201ENSMUST00000209418 2272 ntBASIC21.22■□□□□ 0.99
Tpm1P58771 Gm43182-201ENSMUST00000199476 2528 ntBASIC21.22■□□□□ 0.99
Tpm1P58771 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Tpm1P58771 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Tpm1P58771 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
Tpm1P58771 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Tpm1P58771 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Tpm1P58771 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC21.21■□□□□ 0.99
Tpm1P58771 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Tpm1P58771 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Tpm1P58771 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC21.21■□□□□ 0.99
Tpm1P58771 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Tpm1P58771 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Tpm1P58771 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Tpm1P58771 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC21.21■□□□□ 0.99
Tpm1P58771 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.99
Tpm1P58771 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
Tpm1P58771 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Tpm1P58771 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
Tpm1P58771 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
Tpm1P58771 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Tpm1P58771 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Tpm1P58771 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Tpm1P58771 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC21.2■□□□□ 0.98
Tpm1P58771 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Tpm1P58771 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Tpm1P58771 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Tpm1P58771 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Tpm1P58771 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Tpm1P58771 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC21.2■□□□□ 0.98
Tpm1P58771 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Tpm1P58771 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Tpm1P58771 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Tpm1P58771 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC21.19■□□□□ 0.98
Tpm1P58771 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Tpm1P58771 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Tpm1P58771 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
Tpm1P58771 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
Tpm1P58771 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC21.18■□□□□ 0.98
Tpm1P58771 Grk6-206ENSMUST00000224995 2971 ntBASIC21.18■□□□□ 0.98
Tpm1P58771 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Tpm1P58771 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
Tpm1P58771 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Tpm1P58771 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Tpm1P58771 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
Tpm1P58771 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC21.18■□□□□ 0.98
Tpm1P58771 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Tpm1P58771 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC21.18■□□□□ 0.98
Tpm1P58771 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Tpm1P58771 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
Tpm1P58771 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Tpm1P58771 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Tpm1P58771 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Tpm1P58771 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Tpm1P58771 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC21.18■□□□□ 0.98
Tpm1P58771 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC21.18■□□□□ 0.98
Tpm1P58771 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Tpm1P58771 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Tpm1P58771 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Tpm1P58771 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Tpm1P58771 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Tpm1P58771 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
Tpm1P58771 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Tpm1P58771 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Tpm1P58771 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Tpm1P58771 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Tpm1P58771 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC21.17■□□□□ 0.98
Tpm1P58771 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC21.17■□□□□ 0.98
Tpm1P58771 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Tpm1P58771 Gm10461-201ENSMUST00000202073 4786 ntBASIC21.17■□□□□ 0.98
Tpm1P58771 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Tpm1P58771 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Tpm1P58771 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Tpm1P58771 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
Tpm1P58771 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Tpm1P58771 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Tpm1P58771 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Tpm1P58771 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Tpm1P58771 Gm7417-201ENSMUST00000192950 473 ntBASIC21.16■□□□□ 0.98
Tpm1P58771 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
Tpm1P58771 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Tpm1P58771 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
Tpm1P58771 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Tpm1P58771 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Tpm1P58771 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Tpm1P58771 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
Tpm1P58771 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Tpm1P58771 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Tpm1P58771 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Tpm1P58771 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Tpm1P58771 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Tpm1P58771 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.98
Tpm1P58771 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Tpm1P58771 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC21.14■□□□□ 0.97
Tpm1P58771 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 17.7 ms