Protein–RNA interactions for Protein: P56726

Smo, Smoothened homolog, mousemouse

Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SmoP56726 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC19.21■□□□□ 0.67
SmoP56726 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
SmoP56726 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
SmoP56726 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC19.2■□□□□ 0.66
SmoP56726 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SmoP56726 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SmoP56726 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SmoP56726 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SmoP56726 Gm6420-201ENSMUST00000193885 723 ntBASIC19.2■□□□□ 0.66
SmoP56726 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SmoP56726 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
SmoP56726 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
SmoP56726 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
SmoP56726 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
SmoP56726 Gm29257-201ENSMUST00000186115 639 ntBASIC19.19■□□□□ 0.66
SmoP56726 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SmoP56726 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
SmoP56726 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC19.19■□□□□ 0.66
SmoP56726 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SmoP56726 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SmoP56726 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SmoP56726 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SmoP56726 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
SmoP56726 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SmoP56726 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC19.18■□□□□ 0.66
SmoP56726 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
SmoP56726 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SmoP56726 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
SmoP56726 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SmoP56726 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SmoP56726 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
SmoP56726 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SmoP56726 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
SmoP56726 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
SmoP56726 Nespas-201ENSMUST00000143738 1083 ntBASIC19.17■□□□□ 0.66
SmoP56726 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC19.17■□□□□ 0.66
SmoP56726 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SmoP56726 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
SmoP56726 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SmoP56726 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
SmoP56726 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SmoP56726 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SmoP56726 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SmoP56726 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SmoP56726 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SmoP56726 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SmoP56726 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SmoP56726 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SmoP56726 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
SmoP56726 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
SmoP56726 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
SmoP56726 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC19.16■□□□□ 0.66
SmoP56726 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SmoP56726 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC19.16■□□□□ 0.66
SmoP56726 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
SmoP56726 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
SmoP56726 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
SmoP56726 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SmoP56726 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
SmoP56726 Gm42555-201ENSMUST00000199304 1039 ntBASIC19.15■□□□□ 0.66
SmoP56726 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC19.15■□□□□ 0.66
SmoP56726 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC19.15■□□□□ 0.66
SmoP56726 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
SmoP56726 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SmoP56726 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SmoP56726 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
SmoP56726 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
SmoP56726 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
SmoP56726 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SmoP56726 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SmoP56726 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC19.14■□□□□ 0.65
SmoP56726 Gm12933-201ENSMUST00000120203 872 ntBASIC19.14■□□□□ 0.65
SmoP56726 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SmoP56726 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SmoP56726 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
SmoP56726 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SmoP56726 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SmoP56726 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SmoP56726 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SmoP56726 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SmoP56726 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SmoP56726 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SmoP56726 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
SmoP56726 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC19.13■□□□□ 0.65
SmoP56726 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
SmoP56726 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
SmoP56726 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
SmoP56726 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SmoP56726 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SmoP56726 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
SmoP56726 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SmoP56726 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SmoP56726 Gm5540-201ENSMUST00000131852 1848 ntBASIC19.12■□□□□ 0.65
SmoP56726 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC19.12■□□□□ 0.65
SmoP56726 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC19.12■□□□□ 0.65
SmoP56726 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SmoP56726 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC19.12■□□□□ 0.65
SmoP56726 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SmoP56726 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC19.12■□□□□ 0.65
SmoP56726 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC19.12■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms