Protein–RNA interactions for Protein: P54846

Nrl, Neural retina-specific leucine zipper protein, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NrlP54846 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
NrlP54846 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
NrlP54846 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
NrlP54846 Gm15043-201ENSMUST00000118843 1543 ntBASIC20.32■□□□□ 0.84
NrlP54846 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
NrlP54846 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC20.31■□□□□ 0.84
NrlP54846 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
NrlP54846 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
NrlP54846 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
NrlP54846 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
NrlP54846 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
NrlP54846 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
NrlP54846 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC20.31■□□□□ 0.84
NrlP54846 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
NrlP54846 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
NrlP54846 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
NrlP54846 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC20.3■□□□□ 0.84
NrlP54846 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
NrlP54846 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC20.3■□□□□ 0.84
NrlP54846 Gm20049-201ENSMUST00000219950 730 ntBASIC20.3■□□□□ 0.84
NrlP54846 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
NrlP54846 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
NrlP54846 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
NrlP54846 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
NrlP54846 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
NrlP54846 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
NrlP54846 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
NrlP54846 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
NrlP54846 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
NrlP54846 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
NrlP54846 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
NrlP54846 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
NrlP54846 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC20.29■□□□□ 0.84
NrlP54846 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
NrlP54846 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
NrlP54846 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
NrlP54846 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
NrlP54846 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
NrlP54846 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
NrlP54846 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
NrlP54846 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
NrlP54846 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
NrlP54846 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC20.28■□□□□ 0.84
NrlP54846 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
NrlP54846 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
NrlP54846 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
NrlP54846 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
NrlP54846 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
NrlP54846 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
NrlP54846 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
NrlP54846 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
NrlP54846 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
NrlP54846 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
NrlP54846 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
NrlP54846 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
NrlP54846 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC20.27■□□□□ 0.84
NrlP54846 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
NrlP54846 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
NrlP54846 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC20.27■□□□□ 0.83
NrlP54846 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
NrlP54846 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NrlP54846 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
NrlP54846 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NrlP54846 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NrlP54846 Gm34220-201ENSMUST00000223001 2709 ntBASIC20.26■□□□□ 0.83
NrlP54846 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NrlP54846 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NrlP54846 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NrlP54846 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
NrlP54846 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
NrlP54846 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC20.25■□□□□ 0.83
NrlP54846 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
NrlP54846 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
NrlP54846 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
NrlP54846 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC20.25■□□□□ 0.83
NrlP54846 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
NrlP54846 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC20.25■□□□□ 0.83
NrlP54846 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
NrlP54846 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
NrlP54846 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
NrlP54846 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC20.25■□□□□ 0.83
NrlP54846 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
NrlP54846 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
NrlP54846 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
NrlP54846 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
NrlP54846 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
NrlP54846 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
NrlP54846 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
NrlP54846 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
NrlP54846 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
NrlP54846 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
NrlP54846 Gm13168-201ENSMUST00000121771 632 ntBASIC20.24■□□□□ 0.83
NrlP54846 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC20.24■□□□□ 0.83
NrlP54846 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
NrlP54846 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
NrlP54846 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
NrlP54846 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
NrlP54846 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
NrlP54846 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
NrlP54846 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 16.5 ms