Protein–RNA interactions for Protein: P48754

Brca1, Breast cancer type 1 susceptibility protein homolog, mousemouse

Predictions only

Length 1,812 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brca1P48754 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC21.74■■□□□ 1.07
Brca1P48754 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Brca1P48754 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC21.73■■□□□ 1.07
Brca1P48754 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC21.73■■□□□ 1.07
Brca1P48754 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Brca1P48754 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Brca1P48754 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Brca1P48754 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Brca1P48754 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Brca1P48754 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Brca1P48754 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Brca1P48754 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
Brca1P48754 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC21.73■■□□□ 1.07
Brca1P48754 Mir5122-201ENSMUST00000175004 89 ntBASIC21.73■■□□□ 1.07
Brca1P48754 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
Brca1P48754 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Brca1P48754 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Brca1P48754 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Brca1P48754 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Brca1P48754 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
Brca1P48754 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Brca1P48754 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Brca1P48754 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Brca1P48754 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Brca1P48754 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Brca1P48754 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC21.71■■□□□ 1.07
Brca1P48754 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
Brca1P48754 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC21.71■■□□□ 1.07
Brca1P48754 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC21.71■■□□□ 1.07
Brca1P48754 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Brca1P48754 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Brca1P48754 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
Brca1P48754 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Brca1P48754 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Brca1P48754 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Brca1P48754 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Brca1P48754 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC21.71■■□□□ 1.07
Brca1P48754 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC21.71■■□□□ 1.07
Brca1P48754 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Brca1P48754 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Brca1P48754 Gm11249-201ENSMUST00000117071 859 ntBASIC21.7■■□□□ 1.06
Brca1P48754 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC21.7■■□□□ 1.06
Brca1P48754 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Brca1P48754 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Brca1P48754 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Brca1P48754 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
Brca1P48754 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Brca1P48754 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Brca1P48754 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Brca1P48754 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC21.69■■□□□ 1.06
Brca1P48754 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC21.69■■□□□ 1.06
Brca1P48754 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC21.69■■□□□ 1.06
Brca1P48754 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Brca1P48754 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Brca1P48754 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC21.69■■□□□ 1.06
Brca1P48754 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
Brca1P48754 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Brca1P48754 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Brca1P48754 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
Brca1P48754 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC21.69■■□□□ 1.06
Brca1P48754 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC21.69■■□□□ 1.06
Brca1P48754 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Brca1P48754 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC21.69■■□□□ 1.06
Brca1P48754 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC21.69■■□□□ 1.06
Brca1P48754 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC21.69■■□□□ 1.06
Brca1P48754 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
Brca1P48754 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Brca1P48754 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC21.68■■□□□ 1.06
Brca1P48754 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Brca1P48754 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Brca1P48754 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Brca1P48754 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Brca1P48754 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Brca1P48754 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
Brca1P48754 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Brca1P48754 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Brca1P48754 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Brca1P48754 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Brca1P48754 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Brca1P48754 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Brca1P48754 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Brca1P48754 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC21.67■■□□□ 1.06
Brca1P48754 Gm18666-201ENSMUST00000190039 958 ntBASIC21.67■■□□□ 1.06
Brca1P48754 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC21.67■■□□□ 1.06
Brca1P48754 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Brca1P48754 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC21.67■■□□□ 1.06
Brca1P48754 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Brca1P48754 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Brca1P48754 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Brca1P48754 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
Brca1P48754 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
Brca1P48754 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
Brca1P48754 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
Brca1P48754 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Brca1P48754 Gm43672-201ENSMUST00000199072 1731 ntBASIC21.66■■□□□ 1.06
Brca1P48754 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
Brca1P48754 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Brca1P48754 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Brca1P48754 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Brca1P48754 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC21.65■■□□□ 1.06
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms