Protein–RNA interactions for Protein: P46099

Klf1, Krueppel-like factor 1, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Klf1P46099 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Klf1P46099 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
Klf1P46099 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Klf1P46099 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC19.72■□□□□ 0.75
Klf1P46099 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Klf1P46099 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Klf1P46099 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Klf1P46099 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
Klf1P46099 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Klf1P46099 Gm13148-201ENSMUST00000118892 745 ntBASIC19.71■□□□□ 0.75
Klf1P46099 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Klf1P46099 Gm8520-201ENSMUST00000186517 868 ntBASIC19.71■□□□□ 0.75
Klf1P46099 Gm10252-201ENSMUST00000209541 832 ntBASIC19.71■□□□□ 0.75
Klf1P46099 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Klf1P46099 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Klf1P46099 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Klf1P46099 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Klf1P46099 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Klf1P46099 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Klf1P46099 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Klf1P46099 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC19.7■□□□□ 0.74
Klf1P46099 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
Klf1P46099 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC19.7■□□□□ 0.74
Klf1P46099 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Klf1P46099 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Klf1P46099 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC19.7■□□□□ 0.74
Klf1P46099 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Klf1P46099 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Klf1P46099 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Klf1P46099 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Klf1P46099 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Klf1P46099 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Klf1P46099 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC19.69■□□□□ 0.74
Klf1P46099 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC19.69■□□□□ 0.74
Klf1P46099 Gm7290-201ENSMUST00000104990 617 ntBASIC19.69■□□□□ 0.74
Klf1P46099 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC19.69■□□□□ 0.74
Klf1P46099 Gm12918-201ENSMUST00000120234 636 ntBASIC19.69■□□□□ 0.74
Klf1P46099 Gm15710-201ENSMUST00000121821 636 ntBASIC19.69■□□□□ 0.74
Klf1P46099 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC19.69■□□□□ 0.74
Klf1P46099 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC19.69■□□□□ 0.74
Klf1P46099 Gm5075-201ENSMUST00000196916 622 ntBASIC19.69■□□□□ 0.74
Klf1P46099 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC19.69■□□□□ 0.74
Klf1P46099 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC19.69■□□□□ 0.74
Klf1P46099 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC19.69■□□□□ 0.74
Klf1P46099 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC19.69■□□□□ 0.74
Klf1P46099 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Klf1P46099 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Klf1P46099 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Klf1P46099 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Klf1P46099 Golph3-205ENSMUST00000228671 2842 ntBASIC19.68■□□□□ 0.74
Klf1P46099 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Klf1P46099 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC19.68■□□□□ 0.74
Klf1P46099 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Klf1P46099 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Klf1P46099 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Klf1P46099 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Klf1P46099 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Klf1P46099 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC19.68■□□□□ 0.74
Klf1P46099 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Klf1P46099 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Klf1P46099 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Klf1P46099 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC19.67■□□□□ 0.74
Klf1P46099 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Klf1P46099 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Klf1P46099 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Klf1P46099 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Klf1P46099 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Klf1P46099 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Klf1P46099 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC19.67■□□□□ 0.74
Klf1P46099 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Klf1P46099 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Klf1P46099 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Klf1P46099 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Klf1P46099 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Klf1P46099 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Klf1P46099 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Klf1P46099 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC19.66■□□□□ 0.74
Klf1P46099 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Klf1P46099 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC19.66■□□□□ 0.74
Klf1P46099 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Klf1P46099 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC19.66■□□□□ 0.74
Klf1P46099 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC19.65■□□□□ 0.74
Klf1P46099 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Klf1P46099 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Klf1P46099 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Klf1P46099 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Klf1P46099 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Klf1P46099 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Klf1P46099 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Klf1P46099 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Klf1P46099 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Klf1P46099 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Klf1P46099 Gm43909-201ENSMUST00000203443 1876 ntBASIC19.65■□□□□ 0.74
Klf1P46099 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.74
Klf1P46099 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC19.64■□□□□ 0.74
Klf1P46099 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
Klf1P46099 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Klf1P46099 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Klf1P46099 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC19.64■□□□□ 0.73
Klf1P46099 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms