Protein–RNA interactions for Protein: P43688

Nkx2-6, Homeobox protein Nkx-2.6, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-6P43688 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Nkx2-6P43688 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
Nkx2-6P43688 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Nkx2-6P43688 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Nkx2-6P43688 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC18.02■□□□□ 0.48
Nkx2-6P43688 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
Nkx2-6P43688 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Nkx2-6P43688 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC18.02■□□□□ 0.48
Nkx2-6P43688 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC18.02■□□□□ 0.48
Nkx2-6P43688 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Nkx2-6P43688 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC18.02■□□□□ 0.48
Nkx2-6P43688 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC18.02■□□□□ 0.47
Nkx2-6P43688 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Nkx2-6P43688 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Nkx2-6P43688 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC18.01■□□□□ 0.47
Nkx2-6P43688 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Nkx2-6P43688 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Nkx2-6P43688 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC18.01■□□□□ 0.47
Nkx2-6P43688 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Nkx2-6P43688 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Nkx2-6P43688 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Nkx2-6P43688 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC18.01■□□□□ 0.47
Nkx2-6P43688 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Nkx2-6P43688 Gm6365-201ENSMUST00000054711 744 ntBASIC18.01■□□□□ 0.47
Nkx2-6P43688 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Nkx2-6P43688 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Nkx2-6P43688 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Nkx2-6P43688 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC18.01■□□□□ 0.47
Nkx2-6P43688 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Nkx2-6P43688 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Nkx2-6P43688 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC18.01■□□□□ 0.47
Nkx2-6P43688 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC18.01■□□□□ 0.47
Nkx2-6P43688 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Nkx2-6P43688 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Nkx2-6P43688 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Nkx2-6P43688 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Nkx2-6P43688 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Nkx2-6P43688 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC18■□□□□ 0.47
Nkx2-6P43688 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC18■□□□□ 0.47
Nkx2-6P43688 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Nkx2-6P43688 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC18■□□□□ 0.47
Nkx2-6P43688 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Nkx2-6P43688 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Nkx2-6P43688 Gm43545-201ENSMUST00000196765 2779 ntBASIC18■□□□□ 0.47
Nkx2-6P43688 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Nkx2-6P43688 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
Nkx2-6P43688 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Nkx2-6P43688 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC17.99■□□□□ 0.47
Nkx2-6P43688 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Nkx2-6P43688 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Nkx2-6P43688 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Nkx2-6P43688 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Nkx2-6P43688 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Nkx2-6P43688 Gm6420-201ENSMUST00000193885 723 ntBASIC17.99■□□□□ 0.47
Nkx2-6P43688 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Nkx2-6P43688 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Nkx2-6P43688 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Nkx2-6P43688 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Nkx2-6P43688 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Nkx2-6P43688 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Nkx2-6P43688 Gm20760-201ENSMUST00000179197 648 ntBASIC17.98■□□□□ 0.47
Nkx2-6P43688 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Nkx2-6P43688 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Nkx2-6P43688 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Nkx2-6P43688 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Nkx2-6P43688 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC17.98■□□□□ 0.47
Nkx2-6P43688 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Nkx2-6P43688 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Nkx2-6P43688 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Nkx2-6P43688 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Nkx2-6P43688 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Nkx2-6P43688 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Nkx2-6P43688 Gm7860-201ENSMUST00000121190 879 ntBASIC17.97■□□□□ 0.47
Nkx2-6P43688 Nespas-201ENSMUST00000143738 1083 ntBASIC17.97■□□□□ 0.47
Nkx2-6P43688 Gm6211-202ENSMUST00000167849 925 ntBASIC17.97■□□□□ 0.47
Nkx2-6P43688 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC17.97■□□□□ 0.47
Nkx2-6P43688 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Nkx2-6P43688 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Nkx2-6P43688 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Nkx2-6P43688 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Nkx2-6P43688 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Nkx2-6P43688 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Nkx2-6P43688 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Nkx2-6P43688 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Nkx2-6P43688 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Nkx2-6P43688 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Nkx2-6P43688 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Nkx2-6P43688 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Nkx2-6P43688 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
Nkx2-6P43688 Gm27032-201ENSMUST00000183124 1116 ntBASIC17.96■□□□□ 0.47
Nkx2-6P43688 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC17.96■□□□□ 0.47
Nkx2-6P43688 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Nkx2-6P43688 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Nkx2-6P43688 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Nkx2-6P43688 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC17.96■□□□□ 0.47
Nkx2-6P43688 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC17.96■□□□□ 0.47
Nkx2-6P43688 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.46
Nkx2-6P43688 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Nkx2-6P43688 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Nkx2-6P43688 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms