Protein–RNA interactions for Protein: P41274

Tnfsf9, Tumor necrosis factor ligand superfamily member 9, mousemouse

Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf9P41274 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Tnfsf9P41274 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Tnfsf9P41274 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Tnfsf9P41274 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC18.21■□□□□ 0.51
Tnfsf9P41274 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC18.21■□□□□ 0.51
Tnfsf9P41274 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Tnfsf9P41274 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Tnfsf9P41274 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
Tnfsf9P41274 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Tnfsf9P41274 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC18.21■□□□□ 0.5
Tnfsf9P41274 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Tnfsf9P41274 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
Tnfsf9P41274 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Tnfsf9P41274 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Tnfsf9P41274 Gm13534-201ENSMUST00000121169 513 ntBASIC18.2■□□□□ 0.5
Tnfsf9P41274 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC18.2■□□□□ 0.5
Tnfsf9P41274 Mir5133-201ENSMUST00000174955 77 ntBASIC18.2■□□□□ 0.5
Tnfsf9P41274 Gm42555-201ENSMUST00000199304 1039 ntBASIC18.2■□□□□ 0.5
Tnfsf9P41274 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Tnfsf9P41274 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Tnfsf9P41274 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Tnfsf9P41274 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Tnfsf9P41274 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Tnfsf9P41274 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Tnfsf9P41274 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Tnfsf9P41274 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Tnfsf9P41274 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Tnfsf9P41274 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
Tnfsf9P41274 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Tnfsf9P41274 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Tnfsf9P41274 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
Tnfsf9P41274 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Tnfsf9P41274 Gm6420-201ENSMUST00000193885 723 ntBASIC18.19■□□□□ 0.5
Tnfsf9P41274 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Tnfsf9P41274 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Tnfsf9P41274 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Tnfsf9P41274 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Tnfsf9P41274 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Tnfsf9P41274 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Tnfsf9P41274 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Tnfsf9P41274 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC18.19■□□□□ 0.5
Tnfsf9P41274 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Tnfsf9P41274 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Tnfsf9P41274 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Tnfsf9P41274 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Tnfsf9P41274 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Tnfsf9P41274 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Tnfsf9P41274 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Tnfsf9P41274 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Tnfsf9P41274 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Tnfsf9P41274 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Tnfsf9P41274 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Tnfsf9P41274 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Tnfsf9P41274 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Tnfsf9P41274 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Tnfsf9P41274 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Tnfsf9P41274 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Tnfsf9P41274 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Tnfsf9P41274 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Tnfsf9P41274 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC18.17■□□□□ 0.5
Tnfsf9P41274 Nespas-201ENSMUST00000143738 1083 ntBASIC18.17■□□□□ 0.5
Tnfsf9P41274 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC18.17■□□□□ 0.5
Tnfsf9P41274 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Tnfsf9P41274 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Tnfsf9P41274 Gm10655-201ENSMUST00000098658 1397 ntBASIC18.17■□□□□ 0.5
Tnfsf9P41274 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Tnfsf9P41274 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Tnfsf9P41274 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Tnfsf9P41274 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Tnfsf9P41274 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Tnfsf9P41274 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Tnfsf9P41274 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Tnfsf9P41274 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC18.15■□□□□ 0.5
Tnfsf9P41274 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Tnfsf9P41274 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Tnfsf9P41274 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Tnfsf9P41274 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC18.15■□□□□ 0.5
Tnfsf9P41274 Gm27032-201ENSMUST00000183124 1116 ntBASIC18.15■□□□□ 0.5
Tnfsf9P41274 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC18.15■□□□□ 0.5
Tnfsf9P41274 Hsf1-207ENSMUST00000228371 2102 ntBASIC18.15■□□□□ 0.5
Tnfsf9P41274 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC18.15■□□□□ 0.5
Tnfsf9P41274 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC18.15■□□□□ 0.5
Tnfsf9P41274 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Tnfsf9P41274 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Tnfsf9P41274 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Tnfsf9P41274 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Tnfsf9P41274 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Tnfsf9P41274 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC18.15■□□□□ 0.5
Tnfsf9P41274 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Tnfsf9P41274 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Tnfsf9P41274 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Tnfsf9P41274 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Tnfsf9P41274 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Tnfsf9P41274 Gm32699-201ENSMUST00000221728 1988 ntBASIC18.14■□□□□ 0.49
Tnfsf9P41274 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC18.14■□□□□ 0.49
Tnfsf9P41274 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC18.14■□□□□ 0.49
Tnfsf9P41274 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Tnfsf9P41274 Gm6365-201ENSMUST00000054711 744 ntBASIC18.14■□□□□ 0.49
Tnfsf9P41274 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Tnfsf9P41274 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms