Protein–RNA interactions for Protein: P35710

Sox5, Transcription factor SOX-5, mousemouse

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox5P35710 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Sox5P35710 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Sox5P35710 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Sox5P35710 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
Sox5P35710 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Sox5P35710 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
Sox5P35710 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
Sox5P35710 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Sox5P35710 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Sox5P35710 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Sox5P35710 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Sox5P35710 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Sox5P35710 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC20.78■□□□□ 0.92
Sox5P35710 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Sox5P35710 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Sox5P35710 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Sox5P35710 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Sox5P35710 Gm35558-201ENSMUST00000222675 2219 ntBASIC20.78■□□□□ 0.92
Sox5P35710 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Sox5P35710 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Sox5P35710 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Sox5P35710 Gm5953-201ENSMUST00000220644 2616 ntBASIC20.77■□□□□ 0.92
Sox5P35710 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Sox5P35710 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Sox5P35710 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
Sox5P35710 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Sox5P35710 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Sox5P35710 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
Sox5P35710 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Sox5P35710 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC20.77■□□□□ 0.92
Sox5P35710 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Sox5P35710 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC20.77■□□□□ 0.92
Sox5P35710 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Sox5P35710 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Sox5P35710 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Sox5P35710 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Sox5P35710 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.91
Sox5P35710 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Sox5P35710 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
Sox5P35710 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Sox5P35710 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Sox5P35710 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
Sox5P35710 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
Sox5P35710 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
Sox5P35710 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Sox5P35710 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC20.76■□□□□ 0.91
Sox5P35710 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Sox5P35710 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Sox5P35710 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
Sox5P35710 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Sox5P35710 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC20.76■□□□□ 0.91
Sox5P35710 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Sox5P35710 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC20.75■□□□□ 0.91
Sox5P35710 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Sox5P35710 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Sox5P35710 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Sox5P35710 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC20.75■□□□□ 0.91
Sox5P35710 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Sox5P35710 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC20.75■□□□□ 0.91
Sox5P35710 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Sox5P35710 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Sox5P35710 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Sox5P35710 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Sox5P35710 Dmtn-210ENSMUST00000228824 2377 ntBASIC20.74■□□□□ 0.91
Sox5P35710 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Sox5P35710 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Sox5P35710 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Sox5P35710 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Sox5P35710 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Sox5P35710 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Sox5P35710 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Sox5P35710 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC20.74■□□□□ 0.91
Sox5P35710 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Sox5P35710 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Sox5P35710 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC20.74■□□□□ 0.91
Sox5P35710 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC20.74■□□□□ 0.91
Sox5P35710 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC20.74■□□□□ 0.91
Sox5P35710 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC20.73■□□□□ 0.91
Sox5P35710 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Sox5P35710 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Sox5P35710 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Sox5P35710 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Sox5P35710 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Sox5P35710 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Sox5P35710 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Sox5P35710 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Sox5P35710 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Sox5P35710 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Sox5P35710 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Sox5P35710 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC20.72■□□□□ 0.91
Sox5P35710 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC20.72■□□□□ 0.91
Sox5P35710 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Sox5P35710 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC20.72■□□□□ 0.91
Sox5P35710 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Sox5P35710 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Sox5P35710 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC20.72■□□□□ 0.91
Sox5P35710 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Sox5P35710 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Sox5P35710 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC20.71■□□□□ 0.91
Sox5P35710 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms