Protein–RNA interactions for Protein: P35601

Rfc1, Replication factor C subunit 1, mousemouse

Predictions only

Length 1,131 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc1P35601 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Rfc1P35601 Gm6802-201ENSMUST00000167843 1983 ntBASIC20.02■□□□□ 0.8
Rfc1P35601 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Rfc1P35601 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rfc1P35601 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rfc1P35601 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rfc1P35601 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC20.01■□□□□ 0.79
Rfc1P35601 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rfc1P35601 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rfc1P35601 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rfc1P35601 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Rfc1P35601 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Rfc1P35601 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rfc1P35601 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Rfc1P35601 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rfc1P35601 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Rfc1P35601 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC20■□□□□ 0.79
Rfc1P35601 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC20■□□□□ 0.79
Rfc1P35601 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC20■□□□□ 0.79
Rfc1P35601 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Rfc1P35601 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Rfc1P35601 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC20■□□□□ 0.79
Rfc1P35601 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC20■□□□□ 0.79
Rfc1P35601 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Rfc1P35601 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
Rfc1P35601 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Rfc1P35601 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rfc1P35601 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rfc1P35601 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rfc1P35601 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rfc1P35601 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Rfc1P35601 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rfc1P35601 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Rfc1P35601 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rfc1P35601 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rfc1P35601 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rfc1P35601 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
Rfc1P35601 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
Rfc1P35601 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
Rfc1P35601 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
Rfc1P35601 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC19.98■□□□□ 0.79
Rfc1P35601 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC19.98■□□□□ 0.79
Rfc1P35601 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC19.98■□□□□ 0.79
Rfc1P35601 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC19.98■□□□□ 0.79
Rfc1P35601 Gm42501-201ENSMUST00000200220 1026 ntBASIC19.98■□□□□ 0.79
Rfc1P35601 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC19.98■□□□□ 0.79
Rfc1P35601 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Rfc1P35601 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
Rfc1P35601 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Rfc1P35601 Dapk1-207ENSMUST00000226059 5009 ntBASIC19.98■□□□□ 0.79
Rfc1P35601 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Rfc1P35601 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Rfc1P35601 Rncr4-201ENSMUST00000194541 2234 ntBASIC19.98■□□□□ 0.79
Rfc1P35601 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Rfc1P35601 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rfc1P35601 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
Rfc1P35601 Gm15546-201ENSMUST00000122095 826 ntBASIC19.97■□□□□ 0.79
Rfc1P35601 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC19.97■□□□□ 0.79
Rfc1P35601 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Rfc1P35601 Gm7143-201ENSMUST00000222811 859 ntBASIC19.97■□□□□ 0.79
Rfc1P35601 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rfc1P35601 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rfc1P35601 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
Rfc1P35601 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rfc1P35601 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rfc1P35601 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rfc1P35601 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Rfc1P35601 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Rfc1P35601 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC19.96■□□□□ 0.79
Rfc1P35601 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC19.96■□□□□ 0.79
Rfc1P35601 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
Rfc1P35601 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC19.96■□□□□ 0.79
Rfc1P35601 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
Rfc1P35601 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Rfc1P35601 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Rfc1P35601 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Rfc1P35601 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Rfc1P35601 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Rfc1P35601 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC19.95■□□□□ 0.78
Rfc1P35601 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Rfc1P35601 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Rfc1P35601 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Rfc1P35601 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Rfc1P35601 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Rfc1P35601 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Rfc1P35601 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Rfc1P35601 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Rfc1P35601 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC19.95■□□□□ 0.78
Rfc1P35601 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
Rfc1P35601 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Rfc1P35601 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Rfc1P35601 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Rfc1P35601 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC19.95■□□□□ 0.78
Rfc1P35601 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Rfc1P35601 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
Rfc1P35601 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Rfc1P35601 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC19.94■□□□□ 0.78
Rfc1P35601 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Rfc1P35601 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC19.94■□□□□ 0.78
Rfc1P35601 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC19.94■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms