Protein–RNA interactions for Protein: P31240

Pdgfb, Platelet-derived growth factor subunit B, mousemouse

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdgfbP31240 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
PdgfbP31240 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC19.24■□□□□ 0.67
PdgfbP31240 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
PdgfbP31240 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
PdgfbP31240 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PdgfbP31240 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PdgfbP31240 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
PdgfbP31240 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC19.23■□□□□ 0.67
PdgfbP31240 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC19.23■□□□□ 0.67
PdgfbP31240 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PdgfbP31240 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
PdgfbP31240 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
PdgfbP31240 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC19.23■□□□□ 0.67
PdgfbP31240 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PdgfbP31240 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PdgfbP31240 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PdgfbP31240 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PdgfbP31240 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC19.22■□□□□ 0.67
PdgfbP31240 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PdgfbP31240 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PdgfbP31240 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC19.22■□□□□ 0.67
PdgfbP31240 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC19.22■□□□□ 0.67
PdgfbP31240 H2-K2-201ENSMUST00000174250 1049 ntBASIC19.22■□□□□ 0.67
PdgfbP31240 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PdgfbP31240 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PdgfbP31240 Gm32051-202ENSMUST00000197905 2385 ntBASIC19.21■□□□□ 0.67
PdgfbP31240 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
PdgfbP31240 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC19.21■□□□□ 0.67
PdgfbP31240 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PdgfbP31240 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PdgfbP31240 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PdgfbP31240 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PdgfbP31240 Gm37035-201ENSMUST00000194809 2148 ntBASIC19.21■□□□□ 0.67
PdgfbP31240 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
PdgfbP31240 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PdgfbP31240 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC19.2■□□□□ 0.66
PdgfbP31240 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PdgfbP31240 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PdgfbP31240 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PdgfbP31240 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PdgfbP31240 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PdgfbP31240 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PdgfbP31240 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
PdgfbP31240 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC19.2■□□□□ 0.66
PdgfbP31240 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC19.2■□□□□ 0.66
PdgfbP31240 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PdgfbP31240 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
PdgfbP31240 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
PdgfbP31240 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PdgfbP31240 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PdgfbP31240 Gm10167-201ENSMUST00000150411 1479 ntBASIC19.2■□□□□ 0.66
PdgfbP31240 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PdgfbP31240 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PdgfbP31240 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
PdgfbP31240 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PdgfbP31240 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PdgfbP31240 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
PdgfbP31240 Gm10231-201ENSMUST00000181584 441 ntBASIC19.19■□□□□ 0.66
PdgfbP31240 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PdgfbP31240 Gm10175-202ENSMUST00000208752 441 ntBASIC19.19■□□□□ 0.66
PdgfbP31240 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PdgfbP31240 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PdgfbP31240 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PdgfbP31240 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PdgfbP31240 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PdgfbP31240 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
PdgfbP31240 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PdgfbP31240 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PdgfbP31240 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PdgfbP31240 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PdgfbP31240 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC19.19■□□□□ 0.66
PdgfbP31240 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
PdgfbP31240 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC19.18■□□□□ 0.66
PdgfbP31240 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PdgfbP31240 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PdgfbP31240 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC19.18■□□□□ 0.66
PdgfbP31240 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
PdgfbP31240 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
PdgfbP31240 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
PdgfbP31240 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PdgfbP31240 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
PdgfbP31240 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PdgfbP31240 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC19.18■□□□□ 0.66
PdgfbP31240 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
PdgfbP31240 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
PdgfbP31240 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
PdgfbP31240 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PdgfbP31240 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
PdgfbP31240 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PdgfbP31240 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PdgfbP31240 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
PdgfbP31240 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
PdgfbP31240 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PdgfbP31240 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
PdgfbP31240 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC19.17■□□□□ 0.66
PdgfbP31240 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PdgfbP31240 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PdgfbP31240 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PdgfbP31240 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PdgfbP31240 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms