Protein–RNA interactions for Protein: P28660

Nckap1, Nck-associated protein 1, mousemouse

Known RBP Predictions only

Length 1,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nckap1P28660 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Nckap1P28660 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC18.93■□□□□ 0.62
Nckap1P28660 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Nckap1P28660 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC18.93■□□□□ 0.62
Nckap1P28660 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Nckap1P28660 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Nckap1P28660 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Nckap1P28660 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Nckap1P28660 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Nckap1P28660 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Nckap1P28660 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Nckap1P28660 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC18.93■□□□□ 0.62
Nckap1P28660 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Nckap1P28660 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC18.92■□□□□ 0.62
Nckap1P28660 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
Nckap1P28660 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Nckap1P28660 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC18.92■□□□□ 0.62
Nckap1P28660 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Nckap1P28660 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Nckap1P28660 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Nckap1P28660 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC18.92■□□□□ 0.62
Nckap1P28660 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC18.92■□□□□ 0.62
Nckap1P28660 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Nckap1P28660 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC18.92■□□□□ 0.62
Nckap1P28660 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Nckap1P28660 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Nckap1P28660 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Nckap1P28660 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC18.92■□□□□ 0.62
Nckap1P28660 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC18.92■□□□□ 0.62
Nckap1P28660 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Nckap1P28660 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Nckap1P28660 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Nckap1P28660 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Nckap1P28660 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Nckap1P28660 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Nckap1P28660 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC18.91■□□□□ 0.62
Nckap1P28660 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Nckap1P28660 Gm6211-202ENSMUST00000167849 925 ntBASIC18.91■□□□□ 0.62
Nckap1P28660 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Nckap1P28660 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Nckap1P28660 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Nckap1P28660 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Nckap1P28660 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC18.9■□□□□ 0.62
Nckap1P28660 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Nckap1P28660 Gm13148-201ENSMUST00000118892 745 ntBASIC18.9■□□□□ 0.62
Nckap1P28660 Gm27032-201ENSMUST00000183124 1116 ntBASIC18.9■□□□□ 0.62
Nckap1P28660 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC18.9■□□□□ 0.62
Nckap1P28660 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC18.9■□□□□ 0.62
Nckap1P28660 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Nckap1P28660 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Nckap1P28660 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC18.9■□□□□ 0.62
Nckap1P28660 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Nckap1P28660 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Nckap1P28660 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.62
Nckap1P28660 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Nckap1P28660 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Nckap1P28660 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Nckap1P28660 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
Nckap1P28660 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
Nckap1P28660 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC18.89■□□□□ 0.61
Nckap1P28660 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC18.89■□□□□ 0.61
Nckap1P28660 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC18.89■□□□□ 0.61
Nckap1P28660 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Nckap1P28660 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC18.89■□□□□ 0.61
Nckap1P28660 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC18.89■□□□□ 0.61
Nckap1P28660 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Nckap1P28660 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Nckap1P28660 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Nckap1P28660 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Nckap1P28660 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
Nckap1P28660 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Nckap1P28660 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Nckap1P28660 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Nckap1P28660 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Nckap1P28660 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Nckap1P28660 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Nckap1P28660 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC18.88■□□□□ 0.61
Nckap1P28660 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Nckap1P28660 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Nckap1P28660 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Nckap1P28660 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Nckap1P28660 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC18.87■□□□□ 0.61
Nckap1P28660 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC18.87■□□□□ 0.61
Nckap1P28660 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
Nckap1P28660 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Nckap1P28660 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC18.87■□□□□ 0.61
Nckap1P28660 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Nckap1P28660 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
Nckap1P28660 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Nckap1P28660 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
Nckap1P28660 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Nckap1P28660 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Nckap1P28660 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Nckap1P28660 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Nckap1P28660 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Nckap1P28660 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Nckap1P28660 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Nckap1P28660 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Nckap1P28660 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC18.86■□□□□ 0.61
Nckap1P28660 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC18.86■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 63.3 ms