Protein–RNA interactions for Protein: P25799

Nfkb1, Nuclear factor NF-kappa-B p105 subunit, mousemouse

Predictions only

Length 971 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nfkb1P25799 Gm34220-201ENSMUST00000223001 2709 ntBASIC19.57■□□□□ 0.72
Nfkb1P25799 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
Nfkb1P25799 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
Nfkb1P25799 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Nfkb1P25799 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Nfkb1P25799 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Nfkb1P25799 Gm12669-201ENSMUST00000122162 1009 ntBASIC19.56■□□□□ 0.72
Nfkb1P25799 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Nfkb1P25799 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC19.56■□□□□ 0.72
Nfkb1P25799 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Nfkb1P25799 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Nfkb1P25799 Gm6365-201ENSMUST00000054711 744 ntBASIC19.56■□□□□ 0.72
Nfkb1P25799 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Nfkb1P25799 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
Nfkb1P25799 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Nfkb1P25799 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Nfkb1P25799 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Nfkb1P25799 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Nfkb1P25799 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Nfkb1P25799 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC19.55■□□□□ 0.72
Nfkb1P25799 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Nfkb1P25799 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Nfkb1P25799 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Nfkb1P25799 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Nfkb1P25799 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Nfkb1P25799 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Nfkb1P25799 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Nfkb1P25799 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Nfkb1P25799 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Nfkb1P25799 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Nfkb1P25799 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Nfkb1P25799 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC19.54■□□□□ 0.72
Nfkb1P25799 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Nfkb1P25799 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Nfkb1P25799 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
Nfkb1P25799 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Nfkb1P25799 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Nfkb1P25799 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Nfkb1P25799 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Nfkb1P25799 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC19.53■□□□□ 0.72
Nfkb1P25799 Gm13148-201ENSMUST00000118892 745 ntBASIC19.53■□□□□ 0.72
Nfkb1P25799 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Nfkb1P25799 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Nfkb1P25799 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Nfkb1P25799 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Nfkb1P25799 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
Nfkb1P25799 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Nfkb1P25799 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Nfkb1P25799 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Nfkb1P25799 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Nfkb1P25799 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Nfkb1P25799 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Nfkb1P25799 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Nfkb1P25799 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.72
Nfkb1P25799 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Nfkb1P25799 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Nfkb1P25799 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Nfkb1P25799 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Nfkb1P25799 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
Nfkb1P25799 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
Nfkb1P25799 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Nfkb1P25799 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Nfkb1P25799 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC19.51■□□□□ 0.71
Nfkb1P25799 Gm7290-201ENSMUST00000104990 617 ntBASIC19.51■□□□□ 0.71
Nfkb1P25799 Gm12918-201ENSMUST00000120234 636 ntBASIC19.51■□□□□ 0.71
Nfkb1P25799 Gm15710-201ENSMUST00000121821 636 ntBASIC19.51■□□□□ 0.71
Nfkb1P25799 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Nfkb1P25799 Gm5075-201ENSMUST00000196916 622 ntBASIC19.51■□□□□ 0.71
Nfkb1P25799 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC19.51■□□□□ 0.71
Nfkb1P25799 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC19.51■□□□□ 0.71
Nfkb1P25799 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Nfkb1P25799 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Nfkb1P25799 Gm32699-201ENSMUST00000221728 1988 ntBASIC19.51■□□□□ 0.71
Nfkb1P25799 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Nfkb1P25799 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Nfkb1P25799 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Nfkb1P25799 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Nfkb1P25799 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Nfkb1P25799 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Nfkb1P25799 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Nfkb1P25799 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Nfkb1P25799 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
Nfkb1P25799 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Nfkb1P25799 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC19.5■□□□□ 0.71
Nfkb1P25799 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Nfkb1P25799 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC19.5■□□□□ 0.71
Nfkb1P25799 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC19.5■□□□□ 0.71
Nfkb1P25799 Gm27032-201ENSMUST00000183124 1116 ntBASIC19.5■□□□□ 0.71
Nfkb1P25799 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Nfkb1P25799 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Nfkb1P25799 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC19.5■□□□□ 0.71
Nfkb1P25799 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Nfkb1P25799 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Nfkb1P25799 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Nfkb1P25799 Gm12441-201ENSMUST00000121806 588 ntBASIC19.49■□□□□ 0.71
Nfkb1P25799 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Nfkb1P25799 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC19.49■□□□□ 0.71
Nfkb1P25799 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Nfkb1P25799 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Nfkb1P25799 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms