Protein–RNA interactions for Protein: P24549

Aldh1a1, Retinal dehydrogenase 1, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Aldh1a1P24549 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Aldh1a1P24549 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Aldh1a1P24549 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Aldh1a1P24549 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Aldh1a1P24549 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC20.52■□□□□ 0.88
Aldh1a1P24549 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Aldh1a1P24549 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
Aldh1a1P24549 AC130671.1-201ENSMUST00000227384 1237 ntBASIC20.52■□□□□ 0.88
Aldh1a1P24549 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Aldh1a1P24549 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Aldh1a1P24549 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Aldh1a1P24549 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.87
Aldh1a1P24549 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
Aldh1a1P24549 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
Aldh1a1P24549 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC20.51■□□□□ 0.87
Aldh1a1P24549 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Aldh1a1P24549 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Aldh1a1P24549 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Aldh1a1P24549 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC20.51■□□□□ 0.87
Aldh1a1P24549 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Aldh1a1P24549 Gm15378-201ENSMUST00000121894 207 ntBASIC20.51■□□□□ 0.87
Aldh1a1P24549 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Aldh1a1P24549 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC20.51■□□□□ 0.87
Aldh1a1P24549 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Aldh1a1P24549 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Aldh1a1P24549 Nrn1-203ENSMUST00000223611 1443 ntBASIC20.51■□□□□ 0.87
Aldh1a1P24549 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Aldh1a1P24549 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Aldh1a1P24549 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Aldh1a1P24549 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC20.5■□□□□ 0.87
Aldh1a1P24549 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Aldh1a1P24549 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Aldh1a1P24549 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Aldh1a1P24549 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Aldh1a1P24549 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Aldh1a1P24549 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Aldh1a1P24549 AC153881.1-201ENSMUST00000214448 284 ntBASIC20.5■□□□□ 0.87
Aldh1a1P24549 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Aldh1a1P24549 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Aldh1a1P24549 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Aldh1a1P24549 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Aldh1a1P24549 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Aldh1a1P24549 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC20.5■□□□□ 0.87
Aldh1a1P24549 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Aldh1a1P24549 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
Aldh1a1P24549 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC20.49■□□□□ 0.87
Aldh1a1P24549 Gm11643-201ENSMUST00000119578 864 ntBASIC20.49■□□□□ 0.87
Aldh1a1P24549 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
Aldh1a1P24549 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC20.49■□□□□ 0.87
Aldh1a1P24549 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC20.49■□□□□ 0.87
Aldh1a1P24549 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Aldh1a1P24549 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Aldh1a1P24549 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Aldh1a1P24549 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Aldh1a1P24549 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Aldh1a1P24549 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Aldh1a1P24549 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
Aldh1a1P24549 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC20.48■□□□□ 0.87
Aldh1a1P24549 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Aldh1a1P24549 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC20.48■□□□□ 0.87
Aldh1a1P24549 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Aldh1a1P24549 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Aldh1a1P24549 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Aldh1a1P24549 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Aldh1a1P24549 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
Aldh1a1P24549 Gm11249-201ENSMUST00000117071 859 ntBASIC20.48■□□□□ 0.87
Aldh1a1P24549 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC20.48■□□□□ 0.87
Aldh1a1P24549 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Aldh1a1P24549 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Aldh1a1P24549 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
Aldh1a1P24549 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Aldh1a1P24549 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC20.47■□□□□ 0.87
Aldh1a1P24549 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC20.47■□□□□ 0.87
Aldh1a1P24549 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC20.47■□□□□ 0.87
Aldh1a1P24549 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC20.47■□□□□ 0.87
Aldh1a1P24549 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Aldh1a1P24549 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Aldh1a1P24549 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Aldh1a1P24549 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Aldh1a1P24549 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC20.47■□□□□ 0.87
Aldh1a1P24549 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Aldh1a1P24549 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
Aldh1a1P24549 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Aldh1a1P24549 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Aldh1a1P24549 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Aldh1a1P24549 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Aldh1a1P24549 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Aldh1a1P24549 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Aldh1a1P24549 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Aldh1a1P24549 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Aldh1a1P24549 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC20.45■□□□□ 0.87
Aldh1a1P24549 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC20.45■□□□□ 0.86
Aldh1a1P24549 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Aldh1a1P24549 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Aldh1a1P24549 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Aldh1a1P24549 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Aldh1a1P24549 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Aldh1a1P24549 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC20.45■□□□□ 0.86
Aldh1a1P24549 Mir1199-201ENSMUST00000117015 119 ntBASIC20.45■□□□□ 0.86
Aldh1a1P24549 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC20.45■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms