Protein–RNA interactions for Protein: P23611

Irf8, Interferon regulatory factor 8, mousemouse

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Irf8P23611 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC20.61■□□□□ 0.89
Irf8P23611 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC20.61■□□□□ 0.89
Irf8P23611 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Irf8P23611 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Irf8P23611 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Irf8P23611 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Irf8P23611 AC126028.2-201ENSMUST00000228100 1833 ntBASIC20.61■□□□□ 0.89
Irf8P23611 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC20.61■□□□□ 0.89
Irf8P23611 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Irf8P23611 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Irf8P23611 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Irf8P23611 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Irf8P23611 Gm18688-201ENSMUST00000204695 1859 ntBASIC20.6■□□□□ 0.89
Irf8P23611 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC20.6■□□□□ 0.89
Irf8P23611 Gm42778-201ENSMUST00000199644 553 ntBASIC20.6■□□□□ 0.89
Irf8P23611 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC20.6■□□□□ 0.89
Irf8P23611 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Irf8P23611 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Irf8P23611 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Irf8P23611 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Irf8P23611 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Irf8P23611 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Irf8P23611 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Irf8P23611 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Irf8P23611 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Irf8P23611 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Irf8P23611 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Irf8P23611 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Irf8P23611 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Irf8P23611 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC20.58■□□□□ 0.89
Irf8P23611 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
Irf8P23611 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
Irf8P23611 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC20.58■□□□□ 0.89
Irf8P23611 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Irf8P23611 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Irf8P23611 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Irf8P23611 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Irf8P23611 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Irf8P23611 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.88
Irf8P23611 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Irf8P23611 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Irf8P23611 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Irf8P23611 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Irf8P23611 Gm8495-201ENSMUST00000188740 694 ntBASIC20.57■□□□□ 0.88
Irf8P23611 Gm10616-201ENSMUST00000205285 2127 ntBASIC20.57■□□□□ 0.88
Irf8P23611 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Irf8P23611 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Irf8P23611 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Irf8P23611 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Irf8P23611 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Irf8P23611 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Irf8P23611 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC20.56■□□□□ 0.88
Irf8P23611 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Irf8P23611 Gm10033-202ENSMUST00000211874 928 ntBASIC20.56■□□□□ 0.88
Irf8P23611 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
Irf8P23611 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Irf8P23611 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Irf8P23611 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Irf8P23611 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Irf8P23611 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Irf8P23611 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Irf8P23611 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Irf8P23611 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Irf8P23611 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Irf8P23611 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Irf8P23611 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Irf8P23611 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC20.55■□□□□ 0.88
Irf8P23611 Gm13534-201ENSMUST00000121169 513 ntBASIC20.55■□□□□ 0.88
Irf8P23611 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC20.55■□□□□ 0.88
Irf8P23611 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
Irf8P23611 Gm42642-201ENSMUST00000200683 355 ntBASIC20.55■□□□□ 0.88
Irf8P23611 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC20.55■□□□□ 0.88
Irf8P23611 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Irf8P23611 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Irf8P23611 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
Irf8P23611 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Irf8P23611 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Irf8P23611 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Irf8P23611 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Irf8P23611 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Irf8P23611 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC20.54■□□□□ 0.88
Irf8P23611 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC20.54■□□□□ 0.88
Irf8P23611 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Irf8P23611 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Irf8P23611 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Irf8P23611 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC20.54■□□□□ 0.88
Irf8P23611 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Irf8P23611 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Irf8P23611 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Irf8P23611 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC20.53■□□□□ 0.88
Irf8P23611 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Irf8P23611 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Irf8P23611 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC20.53■□□□□ 0.88
Irf8P23611 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Irf8P23611 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Irf8P23611 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC20.53■□□□□ 0.88
Irf8P23611 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Irf8P23611 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Irf8P23611 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Irf8P23611 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms