Protein–RNA interactions for Protein: P22518

Clk1, Dual specificity protein kinase CLK1, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk1P22518 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Clk1P22518 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC17.6■□□□□ 0.41
Clk1P22518 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Clk1P22518 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Clk1P22518 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Clk1P22518 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Clk1P22518 Gm11421-201ENSMUST00000122124 294 ntBASIC17.59■□□□□ 0.41
Clk1P22518 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC17.59■□□□□ 0.41
Clk1P22518 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Clk1P22518 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Clk1P22518 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Clk1P22518 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Clk1P22518 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC17.59■□□□□ 0.41
Clk1P22518 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Clk1P22518 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Clk1P22518 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Clk1P22518 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Clk1P22518 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Clk1P22518 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.41
Clk1P22518 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Clk1P22518 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
Clk1P22518 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Clk1P22518 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Clk1P22518 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC17.58■□□□□ 0.4
Clk1P22518 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Clk1P22518 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Clk1P22518 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Clk1P22518 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
Clk1P22518 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Clk1P22518 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Clk1P22518 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Clk1P22518 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Clk1P22518 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Clk1P22518 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Clk1P22518 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Clk1P22518 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Clk1P22518 Gm26833-201ENSMUST00000180899 440 ntBASIC17.57■□□□□ 0.4
Clk1P22518 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC17.57■□□□□ 0.4
Clk1P22518 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC17.57■□□□□ 0.4
Clk1P22518 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Clk1P22518 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Clk1P22518 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Clk1P22518 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Clk1P22518 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Clk1P22518 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Clk1P22518 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Clk1P22518 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Clk1P22518 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC17.56■□□□□ 0.4
Clk1P22518 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Clk1P22518 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC17.56■□□□□ 0.4
Clk1P22518 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Clk1P22518 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC17.56■□□□□ 0.4
Clk1P22518 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Clk1P22518 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Clk1P22518 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Clk1P22518 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Clk1P22518 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Clk1P22518 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Clk1P22518 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC17.55■□□□□ 0.4
Clk1P22518 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC17.55■□□□□ 0.4
Clk1P22518 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC17.55■□□□□ 0.4
Clk1P22518 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Clk1P22518 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Clk1P22518 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Clk1P22518 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Clk1P22518 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Clk1P22518 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Clk1P22518 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Clk1P22518 Gm42911-201ENSMUST00000199360 1630 ntBASIC17.54■□□□□ 0.4
Clk1P22518 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Clk1P22518 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Clk1P22518 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Clk1P22518 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Clk1P22518 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Clk1P22518 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Clk1P22518 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Clk1P22518 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Clk1P22518 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Clk1P22518 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC17.54■□□□□ 0.4
Clk1P22518 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Clk1P22518 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Clk1P22518 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
Clk1P22518 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Clk1P22518 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Clk1P22518 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
Clk1P22518 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
Clk1P22518 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Clk1P22518 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC17.53■□□□□ 0.4
Clk1P22518 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Clk1P22518 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC17.53■□□□□ 0.4
Clk1P22518 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Clk1P22518 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Clk1P22518 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Clk1P22518 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Clk1P22518 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC17.52■□□□□ 0.4
Clk1P22518 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC17.52■□□□□ 0.4
Clk1P22518 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Clk1P22518 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Clk1P22518 Gm21168-201ENSMUST00000199646 1096 ntBASIC17.52■□□□□ 0.4
Clk1P22518 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC17.52■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 63.9 ms