Protein–RNA interactions for Protein: P21237

Bdnf, Brain-derived neurotrophic factor, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BdnfP21237 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
BdnfP21237 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
BdnfP21237 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
BdnfP21237 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
BdnfP21237 Gm35558-201ENSMUST00000222675 2219 ntBASIC18.19■□□□□ 0.5
BdnfP21237 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
BdnfP21237 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
BdnfP21237 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC18.18■□□□□ 0.5
BdnfP21237 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC18.18■□□□□ 0.5
BdnfP21237 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
BdnfP21237 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC18.18■□□□□ 0.5
BdnfP21237 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
BdnfP21237 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC18.18■□□□□ 0.5
BdnfP21237 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
BdnfP21237 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
BdnfP21237 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
BdnfP21237 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
BdnfP21237 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
BdnfP21237 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
BdnfP21237 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
BdnfP21237 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
BdnfP21237 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
BdnfP21237 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC18.17■□□□□ 0.5
BdnfP21237 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
BdnfP21237 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
BdnfP21237 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
BdnfP21237 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
BdnfP21237 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
BdnfP21237 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
BdnfP21237 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC18.17■□□□□ 0.5
BdnfP21237 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
BdnfP21237 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC18.16■□□□□ 0.5
BdnfP21237 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
BdnfP21237 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC18.16■□□□□ 0.5
BdnfP21237 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
BdnfP21237 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
BdnfP21237 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
BdnfP21237 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
BdnfP21237 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
BdnfP21237 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
BdnfP21237 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
BdnfP21237 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
BdnfP21237 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC18.15■□□□□ 0.5
BdnfP21237 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
BdnfP21237 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
BdnfP21237 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
BdnfP21237 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
BdnfP21237 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
BdnfP21237 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC18.15■□□□□ 0.5
BdnfP21237 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
BdnfP21237 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
BdnfP21237 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
BdnfP21237 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
BdnfP21237 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
BdnfP21237 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC18.14■□□□□ 0.49
BdnfP21237 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
BdnfP21237 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
BdnfP21237 Gm9847-201ENSMUST00000052528 599 ntBASIC18.14■□□□□ 0.49
BdnfP21237 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
BdnfP21237 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC18.14■□□□□ 0.49
BdnfP21237 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
BdnfP21237 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC18.14■□□□□ 0.49
BdnfP21237 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC18.14■□□□□ 0.49
BdnfP21237 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
BdnfP21237 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
BdnfP21237 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
BdnfP21237 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC18.14■□□□□ 0.49
BdnfP21237 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
BdnfP21237 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
BdnfP21237 Dmtn-210ENSMUST00000228824 2377 ntBASIC18.13■□□□□ 0.49
BdnfP21237 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
BdnfP21237 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
BdnfP21237 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
BdnfP21237 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
BdnfP21237 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
BdnfP21237 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC18.13■□□□□ 0.49
BdnfP21237 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC18.13■□□□□ 0.49
BdnfP21237 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
BdnfP21237 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
BdnfP21237 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
BdnfP21237 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
BdnfP21237 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
BdnfP21237 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC18.12■□□□□ 0.49
BdnfP21237 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
BdnfP21237 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
BdnfP21237 Grk6-206ENSMUST00000224995 2971 ntBASIC18.12■□□□□ 0.49
BdnfP21237 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
BdnfP21237 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
BdnfP21237 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
BdnfP21237 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
BdnfP21237 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
BdnfP21237 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
BdnfP21237 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
BdnfP21237 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
BdnfP21237 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
BdnfP21237 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
BdnfP21237 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
BdnfP21237 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
BdnfP21237 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
BdnfP21237 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms