Protein–RNA interactions for Protein: P08122

Col4a2, Collagen alpha-2(IV) chain, mousemouse

Predictions only

Length 1,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a2P08122 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Col4a2P08122 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Col4a2P08122 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Col4a2P08122 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Col4a2P08122 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC17.95■□□□□ 0.46
Col4a2P08122 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Col4a2P08122 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Col4a2P08122 AC158538.1-201ENSMUST00000225870 294 ntBASIC17.95■□□□□ 0.46
Col4a2P08122 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Col4a2P08122 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Col4a2P08122 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Col4a2P08122 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Col4a2P08122 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Col4a2P08122 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Col4a2P08122 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Col4a2P08122 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Col4a2P08122 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Col4a2P08122 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Col4a2P08122 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Col4a2P08122 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Col4a2P08122 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Col4a2P08122 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Col4a2P08122 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Col4a2P08122 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Col4a2P08122 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC17.94■□□□□ 0.46
Col4a2P08122 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Col4a2P08122 Hsf1-204ENSMUST00000226872 2104 ntBASIC17.94■□□□□ 0.46
Col4a2P08122 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Col4a2P08122 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC17.94■□□□□ 0.46
Col4a2P08122 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Col4a2P08122 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Col4a2P08122 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Col4a2P08122 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Col4a2P08122 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC17.94■□□□□ 0.46
Col4a2P08122 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC17.94■□□□□ 0.46
Col4a2P08122 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Col4a2P08122 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Col4a2P08122 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Col4a2P08122 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Col4a2P08122 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Col4a2P08122 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
Col4a2P08122 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC17.93■□□□□ 0.46
Col4a2P08122 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC17.93■□□□□ 0.46
Col4a2P08122 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC17.93■□□□□ 0.46
Col4a2P08122 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Col4a2P08122 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Col4a2P08122 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Col4a2P08122 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Col4a2P08122 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Col4a2P08122 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Col4a2P08122 Mir6982-201ENSMUST00000184354 68 ntBASIC17.92■□□□□ 0.46
Col4a2P08122 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC17.92■□□□□ 0.46
Col4a2P08122 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Col4a2P08122 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
Col4a2P08122 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Col4a2P08122 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Col4a2P08122 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Col4a2P08122 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC17.92■□□□□ 0.46
Col4a2P08122 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Col4a2P08122 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC17.92■□□□□ 0.46
Col4a2P08122 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC17.92■□□□□ 0.46
Col4a2P08122 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Col4a2P08122 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Col4a2P08122 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC17.92■□□□□ 0.46
Col4a2P08122 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Col4a2P08122 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Col4a2P08122 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Col4a2P08122 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Col4a2P08122 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Col4a2P08122 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Col4a2P08122 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Col4a2P08122 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC17.9■□□□□ 0.46
Col4a2P08122 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC17.9■□□□□ 0.46
Col4a2P08122 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Col4a2P08122 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Col4a2P08122 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC17.9■□□□□ 0.46
Col4a2P08122 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Col4a2P08122 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Col4a2P08122 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Col4a2P08122 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Col4a2P08122 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Col4a2P08122 Gm13509-201ENSMUST00000119733 1308 ntBASIC17.89■□□□□ 0.46
Col4a2P08122 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
Col4a2P08122 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Col4a2P08122 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC17.89■□□□□ 0.45
Col4a2P08122 Gm21596-201ENSMUST00000178049 1316 ntBASIC17.89■□□□□ 0.45
Col4a2P08122 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
Col4a2P08122 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Col4a2P08122 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC17.89■□□□□ 0.45
Col4a2P08122 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Col4a2P08122 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
Col4a2P08122 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC17.89■□□□□ 0.45
Col4a2P08122 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Col4a2P08122 Notumos-201ENSMUST00000151998 2659 ntBASIC17.88■□□□□ 0.45
Col4a2P08122 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Col4a2P08122 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Col4a2P08122 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Col4a2P08122 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Col4a2P08122 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Col4a2P08122 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms