Protein–RNA interactions for Protein: P06336

Ig epsilon chain C region, mousemouse

Predictions only

Length 421 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06336 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
P06336 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
P06336 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
P06336 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
P06336 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
P06336 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
P06336 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
P06336 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
P06336 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
P06336 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
P06336 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
P06336 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
P06336 Gm38205-201ENSMUST00000192243 258 ntBASIC17.56■□□□□ 0.4
P06336 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC17.56■□□□□ 0.4
P06336 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
P06336 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC17.55■□□□□ 0.4
P06336 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC17.55■□□□□ 0.4
P06336 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
P06336 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
P06336 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC17.55■□□□□ 0.4
P06336 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC17.55■□□□□ 0.4
P06336 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
P06336 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
P06336 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC17.55■□□□□ 0.4
P06336 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
P06336 Gm37352-201ENSMUST00000193908 2181 ntBASIC17.55■□□□□ 0.4
P06336 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
P06336 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
P06336 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
P06336 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC17.54■□□□□ 0.4
P06336 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
P06336 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
P06336 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
P06336 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
P06336 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
P06336 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
P06336 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
P06336 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC17.54■□□□□ 0.4
P06336 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
P06336 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC17.54■□□□□ 0.4
P06336 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
P06336 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
P06336 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
P06336 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
P06336 Gm13234-201ENSMUST00000120010 747 ntBASIC17.53■□□□□ 0.4
P06336 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
P06336 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC17.53■□□□□ 0.4
P06336 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
P06336 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
P06336 Gm8495-201ENSMUST00000188740 694 ntBASIC17.53■□□□□ 0.4
P06336 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC17.53■□□□□ 0.4
P06336 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
P06336 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
P06336 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
P06336 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC17.53■□□□□ 0.4
P06336 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
P06336 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
P06336 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
P06336 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
P06336 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
P06336 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC17.53■□□□□ 0.4
P06336 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
P06336 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
P06336 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
P06336 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC17.52■□□□□ 0.4
P06336 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
P06336 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
P06336 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
P06336 Gm42642-201ENSMUST00000200683 355 ntBASIC17.52■□□□□ 0.4
P06336 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
P06336 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
P06336 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
P06336 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
P06336 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
P06336 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
P06336 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
P06336 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC17.51■□□□□ 0.39
P06336 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
P06336 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
P06336 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC17.51■□□□□ 0.39
P06336 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
P06336 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
P06336 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
P06336 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
P06336 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
P06336 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
P06336 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
P06336 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
P06336 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
P06336 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
P06336 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
P06336 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
P06336 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC17.5■□□□□ 0.39
P06336 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
P06336 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
P06336 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
P06336 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC17.49■□□□□ 0.39
P06336 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC17.49■□□□□ 0.39
P06336 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
P06336 Gm18671-201ENSMUST00000214826 683 ntBASIC17.49■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms