Protein–RNA interactions for Protein: P06328

Ig heavy chain V region VH558 B4, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06328 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
P06328 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
P06328 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
P06328 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
P06328 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
P06328 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
P06328 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
P06328 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
P06328 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
P06328 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
P06328 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
P06328 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
P06328 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
P06328 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
P06328 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
P06328 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
P06328 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
P06328 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
P06328 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
P06328 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
P06328 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
P06328 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
P06328 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
P06328 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
P06328 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
P06328 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
P06328 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
P06328 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
P06328 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
P06328 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC13.9□□□□□ -0.18
P06328 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
P06328 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC13.9□□□□□ -0.18
P06328 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC13.9□□□□□ -0.18
P06328 Gm5576-201ENSMUST00000075809 1236 ntBASIC13.9□□□□□ -0.18
P06328 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
P06328 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC13.9□□□□□ -0.18
P06328 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
P06328 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
P06328 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
P06328 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC13.9□□□□□ -0.18
P06328 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
P06328 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
P06328 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
P06328 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
P06328 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
P06328 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
P06328 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.19
P06328 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
P06328 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
P06328 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
P06328 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC13.89□□□□□ -0.19
P06328 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
P06328 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC13.89□□□□□ -0.19
P06328 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
P06328 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
P06328 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC13.89□□□□□ -0.19
P06328 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC13.89□□□□□ -0.19
P06328 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
P06328 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
P06328 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
P06328 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
P06328 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
P06328 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
P06328 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
P06328 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
P06328 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
P06328 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
P06328 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
P06328 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
P06328 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
P06328 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
P06328 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
P06328 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
P06328 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
P06328 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
P06328 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
P06328 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
P06328 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
P06328 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
P06328 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
P06328 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
P06328 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
P06328 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
P06328 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
P06328 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
P06328 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
P06328 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
P06328 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
P06328 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
P06328 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
P06328 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
P06328 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC13.87□□□□□ -0.19
P06328 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
P06328 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
P06328 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
P06328 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
P06328 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
P06328 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
P06328 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
P06328 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms