Protein–RNA interactions for Protein: O89079

Cope, Coatomer subunit epsilon, mousemouse

Predictions only

Length 308 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopeO89079 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CopeO89079 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
CopeO89079 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
CopeO89079 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
CopeO89079 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
CopeO89079 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
CopeO89079 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC19.63■□□□□ 0.73
CopeO89079 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CopeO89079 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC19.63■□□□□ 0.73
CopeO89079 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
CopeO89079 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC19.63■□□□□ 0.73
CopeO89079 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CopeO89079 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC19.63■□□□□ 0.73
CopeO89079 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CopeO89079 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CopeO89079 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
CopeO89079 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC19.63■□□□□ 0.73
CopeO89079 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CopeO89079 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
CopeO89079 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CopeO89079 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
CopeO89079 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CopeO89079 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
CopeO89079 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
CopeO89079 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC19.62■□□□□ 0.73
CopeO89079 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CopeO89079 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
CopeO89079 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC19.62■□□□□ 0.73
CopeO89079 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC19.62■□□□□ 0.73
CopeO89079 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CopeO89079 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
CopeO89079 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC19.62■□□□□ 0.73
CopeO89079 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CopeO89079 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CopeO89079 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
CopeO89079 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CopeO89079 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CopeO89079 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CopeO89079 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CopeO89079 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CopeO89079 Serp2-204ENSMUST00000228055 705 ntBASIC19.61■□□□□ 0.73
CopeO89079 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CopeO89079 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CopeO89079 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CopeO89079 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
CopeO89079 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC19.61■□□□□ 0.73
CopeO89079 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
CopeO89079 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC19.61■□□□□ 0.73
CopeO89079 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
CopeO89079 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CopeO89079 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CopeO89079 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CopeO89079 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
CopeO89079 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CopeO89079 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
CopeO89079 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC19.6■□□□□ 0.73
CopeO89079 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CopeO89079 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CopeO89079 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CopeO89079 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CopeO89079 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CopeO89079 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CopeO89079 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
CopeO89079 Gm9885-202ENSMUST00000186234 2209 ntBASIC19.59■□□□□ 0.73
CopeO89079 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CopeO89079 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CopeO89079 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CopeO89079 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
CopeO89079 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CopeO89079 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
CopeO89079 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CopeO89079 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CopeO89079 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CopeO89079 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
CopeO89079 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
CopeO89079 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC19.58■□□□□ 0.72
CopeO89079 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC19.58■□□□□ 0.72
CopeO89079 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CopeO89079 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CopeO89079 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
CopeO89079 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CopeO89079 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
CopeO89079 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CopeO89079 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC19.57■□□□□ 0.72
CopeO89079 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC19.57■□□□□ 0.72
CopeO89079 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC19.57■□□□□ 0.72
CopeO89079 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
CopeO89079 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CopeO89079 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CopeO89079 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CopeO89079 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CopeO89079 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
CopeO89079 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CopeO89079 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
CopeO89079 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
CopeO89079 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CopeO89079 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC19.56■□□□□ 0.72
CopeO89079 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC19.56■□□□□ 0.72
CopeO89079 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC19.56■□□□□ 0.72
CopeO89079 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC19.56■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 14.5 ms