Protein–RNA interactions for Protein: O88705

Hcn3, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 3, mousemouse

Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn3O88705 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Hcn3O88705 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Hcn3O88705 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC18.22■□□□□ 0.51
Hcn3O88705 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Hcn3O88705 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Hcn3O88705 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Hcn3O88705 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Hcn3O88705 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Hcn3O88705 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Hcn3O88705 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Hcn3O88705 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Hcn3O88705 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Hcn3O88705 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Hcn3O88705 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Hcn3O88705 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC18.21■□□□□ 0.51
Hcn3O88705 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Hcn3O88705 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC18.21■□□□□ 0.51
Hcn3O88705 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC18.21■□□□□ 0.51
Hcn3O88705 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Hcn3O88705 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Hcn3O88705 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Hcn3O88705 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Hcn3O88705 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Hcn3O88705 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Hcn3O88705 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Hcn3O88705 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Hcn3O88705 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.5
Hcn3O88705 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
Hcn3O88705 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Hcn3O88705 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Hcn3O88705 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Hcn3O88705 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Hcn3O88705 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Hcn3O88705 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Hcn3O88705 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Hcn3O88705 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC18.2■□□□□ 0.5
Hcn3O88705 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Hcn3O88705 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Hcn3O88705 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Hcn3O88705 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Hcn3O88705 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Hcn3O88705 Gm37352-201ENSMUST00000193908 2181 ntBASIC18.2■□□□□ 0.5
Hcn3O88705 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Hcn3O88705 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Hcn3O88705 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Hcn3O88705 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
Hcn3O88705 Gm42922-201ENSMUST00000195887 2078 ntBASIC18.19■□□□□ 0.5
Hcn3O88705 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Hcn3O88705 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Hcn3O88705 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Hcn3O88705 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Hcn3O88705 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Hcn3O88705 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Hcn3O88705 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Hcn3O88705 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Hcn3O88705 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Hcn3O88705 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC18.18■□□□□ 0.5
Hcn3O88705 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Hcn3O88705 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Hcn3O88705 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC18.18■□□□□ 0.5
Hcn3O88705 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC18.18■□□□□ 0.5
Hcn3O88705 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC18.18■□□□□ 0.5
Hcn3O88705 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC18.18■□□□□ 0.5
Hcn3O88705 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Hcn3O88705 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Hcn3O88705 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Hcn3O88705 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Hcn3O88705 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Hcn3O88705 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Hcn3O88705 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Hcn3O88705 Gm15853-202ENSMUST00000195518 2041 ntBASIC18.17■□□□□ 0.5
Hcn3O88705 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC18.17■□□□□ 0.5
Hcn3O88705 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC18.17■□□□□ 0.5
Hcn3O88705 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Hcn3O88705 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC18.17■□□□□ 0.5
Hcn3O88705 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC18.17■□□□□ 0.5
Hcn3O88705 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Hcn3O88705 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Hcn3O88705 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Hcn3O88705 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Hcn3O88705 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Hcn3O88705 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Hcn3O88705 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Hcn3O88705 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC18.16■□□□□ 0.5
Hcn3O88705 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Hcn3O88705 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Hcn3O88705 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Hcn3O88705 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Hcn3O88705 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Hcn3O88705 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC18.15■□□□□ 0.5
Hcn3O88705 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC18.15■□□□□ 0.5
Hcn3O88705 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Hcn3O88705 AC123834.2-201ENSMUST00000224038 2340 ntBASIC18.15■□□□□ 0.5
Hcn3O88705 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Hcn3O88705 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Hcn3O88705 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Hcn3O88705 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Hcn3O88705 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Hcn3O88705 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC18.15■□□□□ 0.5
Hcn3O88705 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 95.5 ms