Protein–RNA interactions for Protein: O88456

Capns1, Calpain small subunit 1, mousemouse

Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Capns1O88456 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Capns1O88456 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC17.52■□□□□ 0.4
Capns1O88456 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC17.52■□□□□ 0.4
Capns1O88456 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Capns1O88456 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Capns1O88456 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Capns1O88456 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Capns1O88456 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Capns1O88456 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Capns1O88456 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC17.52■□□□□ 0.4
Capns1O88456 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Capns1O88456 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
Capns1O88456 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Capns1O88456 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Capns1O88456 Gm45606-201ENSMUST00000209836 2795 ntBASIC17.51■□□□□ 0.39
Capns1O88456 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Capns1O88456 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Capns1O88456 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC17.51■□□□□ 0.39
Capns1O88456 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Capns1O88456 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Capns1O88456 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Capns1O88456 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC17.51■□□□□ 0.39
Capns1O88456 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Capns1O88456 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Capns1O88456 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Capns1O88456 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Capns1O88456 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Capns1O88456 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Capns1O88456 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Capns1O88456 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC17.5■□□□□ 0.39
Capns1O88456 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Capns1O88456 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Capns1O88456 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Capns1O88456 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Capns1O88456 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Capns1O88456 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Capns1O88456 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Capns1O88456 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Capns1O88456 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Capns1O88456 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Capns1O88456 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Capns1O88456 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Capns1O88456 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Capns1O88456 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC17.49■□□□□ 0.39
Capns1O88456 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Capns1O88456 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Capns1O88456 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC17.49■□□□□ 0.39
Capns1O88456 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Capns1O88456 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC17.49■□□□□ 0.39
Capns1O88456 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Capns1O88456 Gm43530-201ENSMUST00000195920 274 ntBASIC17.49■□□□□ 0.39
Capns1O88456 Gm2011-201ENSMUST00000203124 1263 ntBASIC17.49■□□□□ 0.39
Capns1O88456 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Capns1O88456 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC17.49■□□□□ 0.39
Capns1O88456 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Capns1O88456 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Capns1O88456 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Capns1O88456 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
Capns1O88456 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Capns1O88456 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Capns1O88456 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Capns1O88456 Gm6627-201ENSMUST00000218299 2386 ntBASIC17.48■□□□□ 0.39
Capns1O88456 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Capns1O88456 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Capns1O88456 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Capns1O88456 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Capns1O88456 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Capns1O88456 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC17.48■□□□□ 0.39
Capns1O88456 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Capns1O88456 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC17.48■□□□□ 0.39
Capns1O88456 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Capns1O88456 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Capns1O88456 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Capns1O88456 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Capns1O88456 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Capns1O88456 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Capns1O88456 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Capns1O88456 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC17.48■□□□□ 0.39
Capns1O88456 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Capns1O88456 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Capns1O88456 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Capns1O88456 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC17.47■□□□□ 0.39
Capns1O88456 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Capns1O88456 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Capns1O88456 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC17.47■□□□□ 0.39
Capns1O88456 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Capns1O88456 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC17.47■□□□□ 0.39
Capns1O88456 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Capns1O88456 Dapk1-207ENSMUST00000226059 5009 ntBASIC17.47■□□□□ 0.39
Capns1O88456 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Capns1O88456 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Capns1O88456 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
Capns1O88456 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Capns1O88456 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Capns1O88456 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC17.46■□□□□ 0.39
Capns1O88456 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Capns1O88456 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Capns1O88456 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
Capns1O88456 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC17.46■□□□□ 0.39
Capns1O88456 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms