Protein–RNA interactions for Protein: O55142

Rpl35a, 60S ribosomal protein L35a, mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl35aO55142 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rpl35aO55142 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rpl35aO55142 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rpl35aO55142 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Rpl35aO55142 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rpl35aO55142 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rpl35aO55142 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rpl35aO55142 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Rpl35aO55142 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC14.17□□□□□ -0.14
Rpl35aO55142 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC14.17□□□□□ -0.14
Rpl35aO55142 Gm18671-201ENSMUST00000214826 683 ntBASIC14.17□□□□□ -0.14
Rpl35aO55142 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rpl35aO55142 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rpl35aO55142 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Rpl35aO55142 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Rpl35aO55142 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rpl35aO55142 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rpl35aO55142 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rpl35aO55142 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC14.16□□□□□ -0.14
Rpl35aO55142 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Rpl35aO55142 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rpl35aO55142 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC14.16□□□□□ -0.14
Rpl35aO55142 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rpl35aO55142 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Rpl35aO55142 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rpl35aO55142 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rpl35aO55142 Shroom3-211ENSMUST00000225438 5742 ntBASIC14.16□□□□□ -0.14
Rpl35aO55142 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rpl35aO55142 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC14.16□□□□□ -0.14
Rpl35aO55142 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rpl35aO55142 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Rpl35aO55142 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Rpl35aO55142 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Rpl35aO55142 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC14.15□□□□□ -0.14
Rpl35aO55142 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Rpl35aO55142 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rpl35aO55142 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rpl35aO55142 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC14.15□□□□□ -0.14
Rpl35aO55142 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rpl35aO55142 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Rpl35aO55142 Gm42569-201ENSMUST00000200539 472 ntBASIC14.15□□□□□ -0.14
Rpl35aO55142 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rpl35aO55142 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Rpl35aO55142 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rpl35aO55142 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Rpl35aO55142 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rpl35aO55142 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rpl35aO55142 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rpl35aO55142 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rpl35aO55142 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rpl35aO55142 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rpl35aO55142 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rpl35aO55142 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC14.14□□□□□ -0.15
Rpl35aO55142 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rpl35aO55142 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rpl35aO55142 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rpl35aO55142 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
Rpl35aO55142 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rpl35aO55142 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rpl35aO55142 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC14.14□□□□□ -0.15
Rpl35aO55142 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Rpl35aO55142 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rpl35aO55142 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
Rpl35aO55142 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rpl35aO55142 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Rpl35aO55142 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Rpl35aO55142 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rpl35aO55142 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Rpl35aO55142 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rpl35aO55142 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rpl35aO55142 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Rpl35aO55142 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Rpl35aO55142 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rpl35aO55142 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Rpl35aO55142 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Rpl35aO55142 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC14.13□□□□□ -0.15
Rpl35aO55142 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rpl35aO55142 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rpl35aO55142 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Rpl35aO55142 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Rpl35aO55142 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rpl35aO55142 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rpl35aO55142 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Rpl35aO55142 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rpl35aO55142 Gm20100-201ENSMUST00000209418 2272 ntBASIC14.12□□□□□ -0.15
Rpl35aO55142 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rpl35aO55142 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rpl35aO55142 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rpl35aO55142 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rpl35aO55142 Gm14281-201ENSMUST00000121700 1294 ntBASIC14.12□□□□□ -0.15
Rpl35aO55142 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC14.12□□□□□ -0.15
Rpl35aO55142 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rpl35aO55142 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rpl35aO55142 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Rpl35aO55142 Reep4-203ENSMUST00000226563 1444 ntBASIC14.12□□□□□ -0.15
Rpl35aO55142 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC14.12□□□□□ -0.15
Rpl35aO55142 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rpl35aO55142 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Rpl35aO55142 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rpl35aO55142 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC14.11□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms