Protein–RNA interactions for Protein: O54991

Cntnap1, Contactin-associated protein 1, mousemouse

Predictions only

Length 1,385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cntnap1O54991 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC25.06■■□□□ 1.6
Cntnap1O54991 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
Cntnap1O54991 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC25.05■■□□□ 1.6
Cntnap1O54991 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC25.05■■□□□ 1.6
Cntnap1O54991 Gm3375-201ENSMUST00000203929 796 ntBASIC25.05■■□□□ 1.6
Cntnap1O54991 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC25.05■■□□□ 1.6
Cntnap1O54991 AC140264.2-202ENSMUST00000218746 817 ntBASIC25.05■■□□□ 1.6
Cntnap1O54991 Gm18032-201ENSMUST00000222541 538 ntBASIC25.05■■□□□ 1.6
Cntnap1O54991 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Cntnap1O54991 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC25.05■■□□□ 1.6
Cntnap1O54991 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC25.05■■□□□ 1.6
Cntnap1O54991 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
Cntnap1O54991 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC25.05■■□□□ 1.6
Cntnap1O54991 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
Cntnap1O54991 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
Cntnap1O54991 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC25.05■■□□□ 1.6
Cntnap1O54991 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Cntnap1O54991 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
Cntnap1O54991 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
Cntnap1O54991 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC25.04■■□□□ 1.6
Cntnap1O54991 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC25.04■■□□□ 1.6
Cntnap1O54991 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC25.04■■□□□ 1.6
Cntnap1O54991 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
Cntnap1O54991 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
Cntnap1O54991 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC25.04■■□□□ 1.6
Cntnap1O54991 AC156016.1-201ENSMUST00000227190 1035 ntBASIC25.04■■□□□ 1.6
Cntnap1O54991 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC25.04■■□□□ 1.6
Cntnap1O54991 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Cntnap1O54991 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Cntnap1O54991 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC25.03■■□□□ 1.6
Cntnap1O54991 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
Cntnap1O54991 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Cntnap1O54991 AC130713.1-201ENSMUST00000228853 1096 ntBASIC25.03■■□□□ 1.6
Cntnap1O54991 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Cntnap1O54991 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
Cntnap1O54991 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
Cntnap1O54991 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC25.02■■□□□ 1.6
Cntnap1O54991 H3f3aos-201ENSMUST00000097448 2905 ntBASIC25.02■■□□□ 1.6
Cntnap1O54991 Gm14859-201ENSMUST00000117752 357 ntBASIC25.02■■□□□ 1.6
Cntnap1O54991 Gm11927-201ENSMUST00000118472 759 ntBASIC25.02■■□□□ 1.6
Cntnap1O54991 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC25.02■■□□□ 1.6
Cntnap1O54991 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC25.02■■□□□ 1.6
Cntnap1O54991 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
Cntnap1O54991 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC25.01■■□□□ 1.59
Cntnap1O54991 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC25.01■■□□□ 1.59
Cntnap1O54991 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC25.01■■□□□ 1.59
Cntnap1O54991 Gm43183-201ENSMUST00000200632 547 ntBASIC25.01■■□□□ 1.59
Cntnap1O54991 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
Cntnap1O54991 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
Cntnap1O54991 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
Cntnap1O54991 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
Cntnap1O54991 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
Cntnap1O54991 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC25■■□□□ 1.59
Cntnap1O54991 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC25■■□□□ 1.59
Cntnap1O54991 Wnt10b-205ENSMUST00000226846 1204 ntBASIC25■■□□□ 1.59
Cntnap1O54991 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC25■■□□□ 1.59
Cntnap1O54991 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC25■■□□□ 1.59
Cntnap1O54991 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
Cntnap1O54991 Gm44771-201ENSMUST00000206975 626 ntBASIC24.99■■□□□ 1.59
Cntnap1O54991 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC24.99■■□□□ 1.59
Cntnap1O54991 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC24.98■■□□□ 1.59
Cntnap1O54991 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
Cntnap1O54991 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC24.98■■□□□ 1.59
Cntnap1O54991 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
Cntnap1O54991 Otx2os1-204ENSMUST00000227221 751 ntBASIC24.98■■□□□ 1.59
Cntnap1O54991 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC24.98■■□□□ 1.59
Cntnap1O54991 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
Cntnap1O54991 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
Cntnap1O54991 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC24.97■■□□□ 1.59
Cntnap1O54991 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
Cntnap1O54991 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
Cntnap1O54991 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC24.97■■□□□ 1.59
Cntnap1O54991 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
Cntnap1O54991 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
Cntnap1O54991 AC133598.3-202ENSMUST00000224219 531 ntBASIC24.97■■□□□ 1.59
Cntnap1O54991 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC24.97■■□□□ 1.59
Cntnap1O54991 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC24.97■■□□□ 1.59
Cntnap1O54991 Gm37415-201ENSMUST00000192265 2054 ntBASIC24.97■■□□□ 1.59
Cntnap1O54991 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC24.97■■□□□ 1.59
Cntnap1O54991 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
Cntnap1O54991 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC24.96■■□□□ 1.59
Cntnap1O54991 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC24.96■■□□□ 1.59
Cntnap1O54991 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
Cntnap1O54991 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC24.96■■□□□ 1.59
Cntnap1O54991 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
Cntnap1O54991 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
Cntnap1O54991 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
Cntnap1O54991 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC24.95■■□□□ 1.59
Cntnap1O54991 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC24.95■■□□□ 1.59
Cntnap1O54991 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.59
Cntnap1O54991 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.59
Cntnap1O54991 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.59
Cntnap1O54991 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.59
Cntnap1O54991 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.59
Cntnap1O54991 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC24.95■■□□□ 1.59
Cntnap1O54991 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC24.95■■□□□ 1.58
Cntnap1O54991 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC24.95■■□□□ 1.58
Cntnap1O54991 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC24.95■■□□□ 1.58
Cntnap1O54991 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC24.95■■□□□ 1.58
Cntnap1O54991 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
Retrieved 100 of 76,532 protein–RNA pairs in 86.1 ms