Protein–RNA interactions for Protein: O54804

Chka, Choline kinase alpha, mousemouse

Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ChkaO54804 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ChkaO54804 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
ChkaO54804 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
ChkaO54804 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
ChkaO54804 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ChkaO54804 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ChkaO54804 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
ChkaO54804 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ChkaO54804 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ChkaO54804 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
ChkaO54804 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
ChkaO54804 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC19.23■□□□□ 0.67
ChkaO54804 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
ChkaO54804 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ChkaO54804 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
ChkaO54804 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
ChkaO54804 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
ChkaO54804 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
ChkaO54804 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ChkaO54804 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
ChkaO54804 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
ChkaO54804 Gm43182-201ENSMUST00000199476 2528 ntBASIC19.22■□□□□ 0.67
ChkaO54804 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
ChkaO54804 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
ChkaO54804 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC19.22■□□□□ 0.67
ChkaO54804 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ChkaO54804 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ChkaO54804 Gm9885-202ENSMUST00000186234 2209 ntBASIC19.21■□□□□ 0.67
ChkaO54804 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ChkaO54804 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
ChkaO54804 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC19.21■□□□□ 0.67
ChkaO54804 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
ChkaO54804 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ChkaO54804 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
ChkaO54804 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ChkaO54804 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
ChkaO54804 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ChkaO54804 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ChkaO54804 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ChkaO54804 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ChkaO54804 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
ChkaO54804 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ChkaO54804 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
ChkaO54804 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ChkaO54804 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
ChkaO54804 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ChkaO54804 Gm6627-201ENSMUST00000218299 2386 ntBASIC19.2■□□□□ 0.66
ChkaO54804 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ChkaO54804 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
ChkaO54804 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
ChkaO54804 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ChkaO54804 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC19.19■□□□□ 0.66
ChkaO54804 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC19.19■□□□□ 0.66
ChkaO54804 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
ChkaO54804 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ChkaO54804 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
ChkaO54804 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
ChkaO54804 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ChkaO54804 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ChkaO54804 Gm5540-201ENSMUST00000131852 1848 ntBASIC19.18■□□□□ 0.66
ChkaO54804 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ChkaO54804 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC19.18■□□□□ 0.66
ChkaO54804 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ChkaO54804 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
ChkaO54804 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
ChkaO54804 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ChkaO54804 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
ChkaO54804 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC19.18■□□□□ 0.66
ChkaO54804 Mir7075-201ENSMUST00000184187 82 ntBASIC19.18■□□□□ 0.66
ChkaO54804 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ChkaO54804 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
ChkaO54804 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ChkaO54804 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ChkaO54804 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ChkaO54804 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ChkaO54804 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
ChkaO54804 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
ChkaO54804 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ChkaO54804 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ChkaO54804 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ChkaO54804 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ChkaO54804 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ChkaO54804 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
ChkaO54804 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ChkaO54804 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC19.16■□□□□ 0.66
ChkaO54804 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ChkaO54804 Smad6-203ENSMUST00000179458 273 ntBASIC19.16■□□□□ 0.66
ChkaO54804 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC19.16■□□□□ 0.66
ChkaO54804 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
ChkaO54804 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC19.16■□□□□ 0.66
ChkaO54804 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
ChkaO54804 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ChkaO54804 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
ChkaO54804 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
ChkaO54804 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC19.16■□□□□ 0.66
ChkaO54804 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ChkaO54804 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC19.16■□□□□ 0.66
ChkaO54804 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ChkaO54804 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
ChkaO54804 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms