Protein–RNA interactions for Protein: O54788

Dffb, DNA fragmentation factor subunit beta, mousemouse

Known RBP Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DffbO54788 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
DffbO54788 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
DffbO54788 BC021767-201ENSMUST00000126387 1716 ntBASIC16.29■□□□□ 0.2
DffbO54788 Gm14117-201ENSMUST00000122417 843 ntBASIC16.29■□□□□ 0.2
DffbO54788 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
DffbO54788 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
DffbO54788 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC16.29■□□□□ 0.2
DffbO54788 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
DffbO54788 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
DffbO54788 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
DffbO54788 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
DffbO54788 Gm32699-201ENSMUST00000221728 1988 ntBASIC16.29■□□□□ 0.2
DffbO54788 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
DffbO54788 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
DffbO54788 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
DffbO54788 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
DffbO54788 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC16.29■□□□□ 0.2
DffbO54788 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
DffbO54788 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC16.28■□□□□ 0.2
DffbO54788 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
DffbO54788 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
DffbO54788 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
DffbO54788 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
DffbO54788 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
DffbO54788 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
DffbO54788 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
DffbO54788 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
DffbO54788 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC16.28■□□□□ 0.2
DffbO54788 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
DffbO54788 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
DffbO54788 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
DffbO54788 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
DffbO54788 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
DffbO54788 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
DffbO54788 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
DffbO54788 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
DffbO54788 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
DffbO54788 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
DffbO54788 Gm42911-201ENSMUST00000199360 1630 ntBASIC16.27■□□□□ 0.2
DffbO54788 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC16.27■□□□□ 0.2
DffbO54788 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
DffbO54788 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC16.27■□□□□ 0.2
DffbO54788 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
DffbO54788 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
DffbO54788 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC16.27■□□□□ 0.19
DffbO54788 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
DffbO54788 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
DffbO54788 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
DffbO54788 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
DffbO54788 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
DffbO54788 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
DffbO54788 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC16.26■□□□□ 0.19
DffbO54788 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
DffbO54788 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC16.26■□□□□ 0.19
DffbO54788 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
DffbO54788 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
DffbO54788 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC16.26■□□□□ 0.19
DffbO54788 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
DffbO54788 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC16.26■□□□□ 0.19
DffbO54788 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
DffbO54788 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
DffbO54788 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
DffbO54788 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
DffbO54788 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
DffbO54788 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
DffbO54788 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC16.25■□□□□ 0.19
DffbO54788 Gm45102-201ENSMUST00000207427 857 ntBASIC16.25■□□□□ 0.19
DffbO54788 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
DffbO54788 Serp2-204ENSMUST00000228055 705 ntBASIC16.25■□□□□ 0.19
DffbO54788 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
DffbO54788 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
DffbO54788 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC16.25■□□□□ 0.19
DffbO54788 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC16.25■□□□□ 0.19
DffbO54788 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
DffbO54788 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
DffbO54788 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
DffbO54788 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
DffbO54788 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
DffbO54788 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
DffbO54788 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
DffbO54788 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
DffbO54788 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
DffbO54788 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
DffbO54788 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
DffbO54788 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
DffbO54788 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
DffbO54788 Gm6627-201ENSMUST00000218299 2386 ntBASIC16.23■□□□□ 0.19
DffbO54788 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
DffbO54788 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
DffbO54788 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
DffbO54788 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
DffbO54788 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
DffbO54788 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
DffbO54788 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
DffbO54788 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
DffbO54788 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC16.23■□□□□ 0.19
DffbO54788 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC16.23■□□□□ 0.19
DffbO54788 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
DffbO54788 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
DffbO54788 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms