Protein–RNA interactions for Protein: O35943

Fxn, Frataxin, mitochondrial, mousemouse

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FxnO35943 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
FxnO35943 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
FxnO35943 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC17.63■□□□□ 0.41
FxnO35943 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
FxnO35943 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
FxnO35943 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
FxnO35943 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
FxnO35943 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
FxnO35943 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
FxnO35943 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
FxnO35943 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
FxnO35943 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
FxnO35943 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
FxnO35943 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
FxnO35943 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC17.62■□□□□ 0.41
FxnO35943 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
FxnO35943 Smad6-203ENSMUST00000179458 273 ntBASIC17.62■□□□□ 0.41
FxnO35943 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
FxnO35943 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
FxnO35943 AC165080.2-201ENSMUST00000217491 1530 ntBASIC17.62■□□□□ 0.41
FxnO35943 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
FxnO35943 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
FxnO35943 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
FxnO35943 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
FxnO35943 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
FxnO35943 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC17.61■□□□□ 0.41
FxnO35943 Gm8493-201ENSMUST00000196881 489 ntBASIC17.61■□□□□ 0.41
FxnO35943 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC17.61■□□□□ 0.41
FxnO35943 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
FxnO35943 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
FxnO35943 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC17.61■□□□□ 0.41
FxnO35943 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
FxnO35943 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
FxnO35943 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
FxnO35943 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
FxnO35943 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
FxnO35943 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC17.6■□□□□ 0.41
FxnO35943 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
FxnO35943 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
FxnO35943 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC17.6■□□□□ 0.41
FxnO35943 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
FxnO35943 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
FxnO35943 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
FxnO35943 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
FxnO35943 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC17.6■□□□□ 0.41
FxnO35943 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
FxnO35943 Gm5421-201ENSMUST00000181698 2354 ntBASIC17.59■□□□□ 0.41
FxnO35943 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC17.59■□□□□ 0.41
FxnO35943 Gm32699-201ENSMUST00000221728 1988 ntBASIC17.59■□□□□ 0.41
FxnO35943 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
FxnO35943 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
FxnO35943 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
FxnO35943 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
FxnO35943 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
FxnO35943 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
FxnO35943 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
FxnO35943 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
FxnO35943 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
FxnO35943 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
FxnO35943 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
FxnO35943 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
FxnO35943 Gm11421-201ENSMUST00000122124 294 ntBASIC17.58■□□□□ 0.4
FxnO35943 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
FxnO35943 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC17.58■□□□□ 0.4
FxnO35943 Gm27454-201ENSMUST00000185090 204 ntBASIC17.58■□□□□ 0.4
FxnO35943 Gm43173-201ENSMUST00000202246 593 ntBASIC17.58■□□□□ 0.4
FxnO35943 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
FxnO35943 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
FxnO35943 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
FxnO35943 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
FxnO35943 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
FxnO35943 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC17.57■□□□□ 0.4
FxnO35943 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC17.57■□□□□ 0.4
FxnO35943 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
FxnO35943 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
FxnO35943 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
FxnO35943 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
FxnO35943 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC17.57■□□□□ 0.4
FxnO35943 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
FxnO35943 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
FxnO35943 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
FxnO35943 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
FxnO35943 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
FxnO35943 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC17.56■□□□□ 0.4
FxnO35943 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
FxnO35943 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
FxnO35943 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
FxnO35943 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC17.56■□□□□ 0.4
FxnO35943 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
FxnO35943 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC17.56■□□□□ 0.4
FxnO35943 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
FxnO35943 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
FxnO35943 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
FxnO35943 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
FxnO35943 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
FxnO35943 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
FxnO35943 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
FxnO35943 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
FxnO35943 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
FxnO35943 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 13.2 ms