Protein–RNA interactions for Protein: O35874

Slc1a4, Neutral amino acid transporter A, mousemouse

Predictions only

Length 532 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc1a4O35874 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC22.38■■□□□ 1.17
Slc1a4O35874 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
Slc1a4O35874 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC22.38■■□□□ 1.17
Slc1a4O35874 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC22.38■■□□□ 1.17
Slc1a4O35874 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC22.38■■□□□ 1.17
Slc1a4O35874 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC22.38■■□□□ 1.17
Slc1a4O35874 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Slc1a4O35874 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC22.38■■□□□ 1.17
Slc1a4O35874 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Slc1a4O35874 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC22.38■■□□□ 1.17
Slc1a4O35874 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Slc1a4O35874 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Slc1a4O35874 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Slc1a4O35874 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Slc1a4O35874 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC22.37■■□□□ 1.17
Slc1a4O35874 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Slc1a4O35874 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Slc1a4O35874 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Slc1a4O35874 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
Slc1a4O35874 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Slc1a4O35874 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC22.37■■□□□ 1.17
Slc1a4O35874 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
Slc1a4O35874 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC22.37■■□□□ 1.17
Slc1a4O35874 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
Slc1a4O35874 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Slc1a4O35874 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Slc1a4O35874 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Slc1a4O35874 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC22.36■■□□□ 1.17
Slc1a4O35874 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Slc1a4O35874 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Slc1a4O35874 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC22.36■■□□□ 1.17
Slc1a4O35874 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC22.36■■□□□ 1.17
Slc1a4O35874 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Slc1a4O35874 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Slc1a4O35874 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Slc1a4O35874 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC22.35■■□□□ 1.17
Slc1a4O35874 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
Slc1a4O35874 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
Slc1a4O35874 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Slc1a4O35874 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC22.35■■□□□ 1.17
Slc1a4O35874 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC22.35■■□□□ 1.17
Slc1a4O35874 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Slc1a4O35874 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC22.35■■□□□ 1.17
Slc1a4O35874 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Slc1a4O35874 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
Slc1a4O35874 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
Slc1a4O35874 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
Slc1a4O35874 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC22.34■■□□□ 1.17
Slc1a4O35874 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Slc1a4O35874 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Slc1a4O35874 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
Slc1a4O35874 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC22.33■■□□□ 1.17
Slc1a4O35874 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Slc1a4O35874 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Slc1a4O35874 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.17
Slc1a4O35874 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC22.33■■□□□ 1.17
Slc1a4O35874 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC22.33■■□□□ 1.17
Slc1a4O35874 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC22.33■■□□□ 1.16
Slc1a4O35874 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC22.33■■□□□ 1.16
Slc1a4O35874 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Slc1a4O35874 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Slc1a4O35874 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC22.32■■□□□ 1.16
Slc1a4O35874 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC22.32■■□□□ 1.16
Slc1a4O35874 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC22.32■■□□□ 1.16
Slc1a4O35874 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Slc1a4O35874 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Slc1a4O35874 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Slc1a4O35874 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Slc1a4O35874 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC22.32■■□□□ 1.16
Slc1a4O35874 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC22.31■■□□□ 1.16
Slc1a4O35874 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Slc1a4O35874 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Slc1a4O35874 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC22.31■■□□□ 1.16
Slc1a4O35874 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Slc1a4O35874 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC22.31■■□□□ 1.16
Slc1a4O35874 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC22.31■■□□□ 1.16
Slc1a4O35874 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC22.31■■□□□ 1.16
Slc1a4O35874 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Slc1a4O35874 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Slc1a4O35874 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
Slc1a4O35874 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Slc1a4O35874 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC22.31■■□□□ 1.16
Slc1a4O35874 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC22.31■■□□□ 1.16
Slc1a4O35874 Gm45640-201ENSMUST00000210665 1896 ntBASIC22.3■■□□□ 1.16
Slc1a4O35874 Hsf1-204ENSMUST00000226872 2104 ntBASIC22.3■■□□□ 1.16
Slc1a4O35874 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC22.3■■□□□ 1.16
Slc1a4O35874 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Slc1a4O35874 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC22.3■■□□□ 1.16
Slc1a4O35874 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Slc1a4O35874 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC22.3■■□□□ 1.16
Slc1a4O35874 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
Slc1a4O35874 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC22.3■■□□□ 1.16
Slc1a4O35874 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC22.3■■□□□ 1.16
Slc1a4O35874 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Slc1a4O35874 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC22.29■■□□□ 1.16
Slc1a4O35874 Gm13534-201ENSMUST00000121169 513 ntBASIC22.29■■□□□ 1.16
Slc1a4O35874 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC22.29■■□□□ 1.16
Slc1a4O35874 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Slc1a4O35874 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC22.29■■□□□ 1.16
Slc1a4O35874 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC22.28■■□□□ 1.16
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms