Protein–RNA interactions for Protein: O35451

Atf6b, Cyclic AMP-dependent transcription factor ATF-6 beta, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf6bO35451 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Atf6bO35451 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Atf6bO35451 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
Atf6bO35451 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
Atf6bO35451 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC16.47■□□□□ 0.23
Atf6bO35451 AC154266.1-201ENSMUST00000223190 503 ntBASIC16.47■□□□□ 0.23
Atf6bO35451 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC16.47■□□□□ 0.23
Atf6bO35451 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Atf6bO35451 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Atf6bO35451 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Atf6bO35451 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Atf6bO35451 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Atf6bO35451 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Atf6bO35451 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC16.46■□□□□ 0.23
Atf6bO35451 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Atf6bO35451 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Atf6bO35451 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Atf6bO35451 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Atf6bO35451 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC16.46■□□□□ 0.23
Atf6bO35451 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC16.46■□□□□ 0.23
Atf6bO35451 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Atf6bO35451 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Atf6bO35451 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Atf6bO35451 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Atf6bO35451 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Atf6bO35451 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Atf6bO35451 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Atf6bO35451 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Atf6bO35451 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC16.45■□□□□ 0.22
Atf6bO35451 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC16.45■□□□□ 0.22
Atf6bO35451 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Atf6bO35451 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Atf6bO35451 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Atf6bO35451 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Atf6bO35451 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Atf6bO35451 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Atf6bO35451 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Atf6bO35451 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Atf6bO35451 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC16.45■□□□□ 0.22
Atf6bO35451 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Atf6bO35451 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Atf6bO35451 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Atf6bO35451 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
Atf6bO35451 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Atf6bO35451 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC16.45■□□□□ 0.22
Atf6bO35451 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Atf6bO35451 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Atf6bO35451 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Atf6bO35451 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Atf6bO35451 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Atf6bO35451 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Atf6bO35451 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
Atf6bO35451 Gm27801-201ENSMUST00000184174 223 ntBASIC16.44■□□□□ 0.22
Atf6bO35451 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC16.44■□□□□ 0.22
Atf6bO35451 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Atf6bO35451 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Atf6bO35451 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Atf6bO35451 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Atf6bO35451 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Atf6bO35451 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Atf6bO35451 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Atf6bO35451 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Atf6bO35451 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Atf6bO35451 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Atf6bO35451 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Atf6bO35451 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC16.43■□□□□ 0.22
Atf6bO35451 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Atf6bO35451 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Atf6bO35451 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Atf6bO35451 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Atf6bO35451 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Atf6bO35451 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC16.43■□□□□ 0.22
Atf6bO35451 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Atf6bO35451 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC16.42■□□□□ 0.22
Atf6bO35451 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Atf6bO35451 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC16.42■□□□□ 0.22
Atf6bO35451 Gm18284-201ENSMUST00000172604 624 ntBASIC16.42■□□□□ 0.22
Atf6bO35451 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC16.42■□□□□ 0.22
Atf6bO35451 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC16.42■□□□□ 0.22
Atf6bO35451 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Atf6bO35451 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Atf6bO35451 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Atf6bO35451 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Atf6bO35451 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Atf6bO35451 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Atf6bO35451 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Atf6bO35451 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Atf6bO35451 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Atf6bO35451 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC16.41■□□□□ 0.22
Atf6bO35451 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Atf6bO35451 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Atf6bO35451 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Atf6bO35451 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Atf6bO35451 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Atf6bO35451 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Atf6bO35451 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Atf6bO35451 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Atf6bO35451 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Atf6bO35451 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Atf6bO35451 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms