Protein–RNA interactions for Protein: O35350

Capn1, Calpain-1 catalytic subunit, mousemouse

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Capn1O35350 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Capn1O35350 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Capn1O35350 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC17.57■□□□□ 0.4
Capn1O35350 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Capn1O35350 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC17.57■□□□□ 0.4
Capn1O35350 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC17.57■□□□□ 0.4
Capn1O35350 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Capn1O35350 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Capn1O35350 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Capn1O35350 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Capn1O35350 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Capn1O35350 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Capn1O35350 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Capn1O35350 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Capn1O35350 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Capn1O35350 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Capn1O35350 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Capn1O35350 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Capn1O35350 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Capn1O35350 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Capn1O35350 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Capn1O35350 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Capn1O35350 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Capn1O35350 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Capn1O35350 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Capn1O35350 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Capn1O35350 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC17.56■□□□□ 0.4
Capn1O35350 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC17.56■□□□□ 0.4
Capn1O35350 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Capn1O35350 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Capn1O35350 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Capn1O35350 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Capn1O35350 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Capn1O35350 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Capn1O35350 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
Capn1O35350 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Capn1O35350 CT025689.6-201ENSMUST00000224991 1104 ntBASIC17.55■□□□□ 0.4
Capn1O35350 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Capn1O35350 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Capn1O35350 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
Capn1O35350 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC17.55■□□□□ 0.4
Capn1O35350 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Capn1O35350 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Capn1O35350 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Capn1O35350 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Capn1O35350 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Capn1O35350 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC17.54■□□□□ 0.4
Capn1O35350 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Capn1O35350 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Capn1O35350 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC17.54■□□□□ 0.4
Capn1O35350 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC17.54■□□□□ 0.4
Capn1O35350 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Capn1O35350 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Capn1O35350 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC17.54■□□□□ 0.4
Capn1O35350 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Capn1O35350 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Capn1O35350 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Capn1O35350 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Capn1O35350 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Capn1O35350 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Capn1O35350 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Capn1O35350 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Capn1O35350 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Capn1O35350 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Capn1O35350 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Capn1O35350 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC17.53■□□□□ 0.4
Capn1O35350 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Capn1O35350 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Capn1O35350 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Capn1O35350 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Capn1O35350 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC17.53■□□□□ 0.4
Capn1O35350 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC17.53■□□□□ 0.4
Capn1O35350 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Capn1O35350 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Capn1O35350 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Capn1O35350 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Capn1O35350 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Capn1O35350 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Capn1O35350 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Capn1O35350 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Capn1O35350 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
Capn1O35350 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Capn1O35350 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC17.52■□□□□ 0.4
Capn1O35350 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Capn1O35350 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Capn1O35350 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Capn1O35350 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
Capn1O35350 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Capn1O35350 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC17.51■□□□□ 0.39
Capn1O35350 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Capn1O35350 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Capn1O35350 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC17.51■□□□□ 0.39
Capn1O35350 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Capn1O35350 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Capn1O35350 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Capn1O35350 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Capn1O35350 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Capn1O35350 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Capn1O35350 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Capn1O35350 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms