Protein–RNA interactions for Protein: O35218

Cpsf2, Cleavage and polyadenylation specificity factor subunit 2, mousemouse

Known RBP Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf2O35218 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Cpsf2O35218 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Cpsf2O35218 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Cpsf2O35218 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Cpsf2O35218 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cpsf2O35218 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Cpsf2O35218 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Cpsf2O35218 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cpsf2O35218 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cpsf2O35218 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Cpsf2O35218 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cpsf2O35218 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cpsf2O35218 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cpsf2O35218 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Cpsf2O35218 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Cpsf2O35218 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Cpsf2O35218 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Cpsf2O35218 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC20.27■□□□□ 0.84
Cpsf2O35218 AC124603.1-201ENSMUST00000223843 308 ntBASIC20.27■□□□□ 0.84
Cpsf2O35218 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC20.27■□□□□ 0.84
Cpsf2O35218 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cpsf2O35218 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Cpsf2O35218 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cpsf2O35218 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.83
Cpsf2O35218 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.83
Cpsf2O35218 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Cpsf2O35218 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Cpsf2O35218 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cpsf2O35218 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Cpsf2O35218 AC140930.3-201ENSMUST00000222935 274 ntBASIC20.26■□□□□ 0.83
Cpsf2O35218 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Cpsf2O35218 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cpsf2O35218 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cpsf2O35218 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cpsf2O35218 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cpsf2O35218 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Cpsf2O35218 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Cpsf2O35218 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cpsf2O35218 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Cpsf2O35218 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC20.25■□□□□ 0.83
Cpsf2O35218 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Cpsf2O35218 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Cpsf2O35218 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cpsf2O35218 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cpsf2O35218 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cpsf2O35218 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cpsf2O35218 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cpsf2O35218 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cpsf2O35218 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC20.24■□□□□ 0.83
Cpsf2O35218 Gm10571-201ENSMUST00000097869 1638 ntBASIC20.24■□□□□ 0.83
Cpsf2O35218 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cpsf2O35218 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC20.24■□□□□ 0.83
Cpsf2O35218 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC20.24■□□□□ 0.83
Cpsf2O35218 Spcs1-204ENSMUST00000226782 949 ntBASIC20.24■□□□□ 0.83
Cpsf2O35218 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cpsf2O35218 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cpsf2O35218 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Cpsf2O35218 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cpsf2O35218 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cpsf2O35218 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cpsf2O35218 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cpsf2O35218 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cpsf2O35218 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Cpsf2O35218 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cpsf2O35218 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Cpsf2O35218 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Cpsf2O35218 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cpsf2O35218 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Cpsf2O35218 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cpsf2O35218 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cpsf2O35218 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC20.23■□□□□ 0.83
Cpsf2O35218 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Cpsf2O35218 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cpsf2O35218 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC20.23■□□□□ 0.83
Cpsf2O35218 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC20.23■□□□□ 0.83
Cpsf2O35218 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cpsf2O35218 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Cpsf2O35218 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cpsf2O35218 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Cpsf2O35218 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cpsf2O35218 Gm12251-201ENSMUST00000117893 792 ntBASIC20.22■□□□□ 0.83
Cpsf2O35218 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cpsf2O35218 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cpsf2O35218 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cpsf2O35218 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Cpsf2O35218 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cpsf2O35218 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cpsf2O35218 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cpsf2O35218 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Cpsf2O35218 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cpsf2O35218 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC20.21■□□□□ 0.83
Cpsf2O35218 Gm21956-201ENSMUST00000179946 522 ntBASIC20.21■□□□□ 0.83
Cpsf2O35218 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Cpsf2O35218 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cpsf2O35218 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cpsf2O35218 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cpsf2O35218 BC021767-201ENSMUST00000126387 1716 ntBASIC20.21■□□□□ 0.83
Cpsf2O35218 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cpsf2O35218 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Cpsf2O35218 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 15.1 ms