Protein–RNA interactions for Protein: O08784

Tcof1, Treacle protein, mousemouse

Known RBP Predictions only

Length 1,320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tcof1O08784 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
Tcof1O08784 Gm45640-201ENSMUST00000210665 1896 ntBASIC22.35■■□□□ 1.17
Tcof1O08784 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Tcof1O08784 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Tcof1O08784 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC22.34■■□□□ 1.17
Tcof1O08784 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC22.34■■□□□ 1.17
Tcof1O08784 Gm7514-201ENSMUST00000209475 934 ntBASIC22.34■■□□□ 1.17
Tcof1O08784 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC22.34■■□□□ 1.17
Tcof1O08784 AC112142.1-201ENSMUST00000228796 918 ntBASIC22.34■■□□□ 1.17
Tcof1O08784 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Tcof1O08784 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC22.34■■□□□ 1.17
Tcof1O08784 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Tcof1O08784 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC22.34■■□□□ 1.17
Tcof1O08784 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC22.34■■□□□ 1.17
Tcof1O08784 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC22.33■■□□□ 1.17
Tcof1O08784 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Tcof1O08784 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC22.33■■□□□ 1.17
Tcof1O08784 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC22.33■■□□□ 1.17
Tcof1O08784 Gm27011-201ENSMUST00000182352 972 ntBASIC22.33■■□□□ 1.17
Tcof1O08784 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
Tcof1O08784 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Tcof1O08784 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.16
Tcof1O08784 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC22.33■■□□□ 1.16
Tcof1O08784 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC22.33■■□□□ 1.16
Tcof1O08784 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
Tcof1O08784 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Tcof1O08784 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Tcof1O08784 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Tcof1O08784 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Tcof1O08784 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Tcof1O08784 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Tcof1O08784 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC22.32■■□□□ 1.16
Tcof1O08784 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC22.32■■□□□ 1.16
Tcof1O08784 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Tcof1O08784 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC22.31■■□□□ 1.16
Tcof1O08784 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC22.31■■□□□ 1.16
Tcof1O08784 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Tcof1O08784 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC22.31■■□□□ 1.16
Tcof1O08784 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Tcof1O08784 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Tcof1O08784 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Tcof1O08784 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Tcof1O08784 Gm13534-201ENSMUST00000121169 513 ntBASIC22.31■■□□□ 1.16
Tcof1O08784 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Tcof1O08784 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
Tcof1O08784 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Tcof1O08784 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Tcof1O08784 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC22.3■■□□□ 1.16
Tcof1O08784 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC22.3■■□□□ 1.16
Tcof1O08784 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
Tcof1O08784 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Tcof1O08784 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC22.3■■□□□ 1.16
Tcof1O08784 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Tcof1O08784 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
Tcof1O08784 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Tcof1O08784 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Tcof1O08784 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Tcof1O08784 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC22.29■■□□□ 1.16
Tcof1O08784 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Tcof1O08784 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Tcof1O08784 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Tcof1O08784 Gm37352-201ENSMUST00000193908 2181 ntBASIC22.29■■□□□ 1.16
Tcof1O08784 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC22.29■■□□□ 1.16
Tcof1O08784 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
Tcof1O08784 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC22.28■■□□□ 1.16
Tcof1O08784 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Tcof1O08784 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Tcof1O08784 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
Tcof1O08784 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Tcof1O08784 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Tcof1O08784 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC22.28■■□□□ 1.16
Tcof1O08784 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC22.28■■□□□ 1.16
Tcof1O08784 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC22.28■■□□□ 1.16
Tcof1O08784 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC22.28■■□□□ 1.16
Tcof1O08784 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Tcof1O08784 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
Tcof1O08784 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC22.27■■□□□ 1.16
Tcof1O08784 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC22.27■■□□□ 1.16
Tcof1O08784 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC22.27■■□□□ 1.16
Tcof1O08784 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Tcof1O08784 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC22.27■■□□□ 1.16
Tcof1O08784 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC22.27■■□□□ 1.16
Tcof1O08784 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC22.27■■□□□ 1.16
Tcof1O08784 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Tcof1O08784 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Tcof1O08784 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.15
Tcof1O08784 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.15
Tcof1O08784 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC22.27■■□□□ 1.15
Tcof1O08784 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC22.26■■□□□ 1.15
Tcof1O08784 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Tcof1O08784 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Tcof1O08784 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Tcof1O08784 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Tcof1O08784 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Tcof1O08784 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC22.26■■□□□ 1.15
Tcof1O08784 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC22.26■■□□□ 1.15
Tcof1O08784 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Tcof1O08784 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC22.26■■□□□ 1.15
Tcof1O08784 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC22.26■■□□□ 1.15
Tcof1O08784 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC22.26■■□□□ 1.15
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms