Protein–RNA interactions for Protein: M0QWN7

Usp35, Ubiquitin-specific peptidase 35, mousemouse

Predictions only

Length 1,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp35M0QWN7 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Usp35M0QWN7 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Usp35M0QWN7 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
Usp35M0QWN7 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC20.36■□□□□ 0.85
Usp35M0QWN7 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC20.36■□□□□ 0.85
Usp35M0QWN7 Gm5112-201ENSMUST00000204407 2368 ntBASIC20.36■□□□□ 0.85
Usp35M0QWN7 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC20.36■□□□□ 0.85
Usp35M0QWN7 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC20.36■□□□□ 0.85
Usp35M0QWN7 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Usp35M0QWN7 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Usp35M0QWN7 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Usp35M0QWN7 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
Usp35M0QWN7 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC20.35■□□□□ 0.85
Usp35M0QWN7 Gm27011-201ENSMUST00000182352 972 ntBASIC20.35■□□□□ 0.85
Usp35M0QWN7 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Usp35M0QWN7 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Usp35M0QWN7 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
Usp35M0QWN7 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Usp35M0QWN7 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Usp35M0QWN7 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC20.35■□□□□ 0.85
Usp35M0QWN7 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Usp35M0QWN7 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Usp35M0QWN7 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Usp35M0QWN7 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Usp35M0QWN7 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Usp35M0QWN7 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC20.34■□□□□ 0.85
Usp35M0QWN7 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Usp35M0QWN7 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Usp35M0QWN7 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC20.34■□□□□ 0.85
Usp35M0QWN7 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Usp35M0QWN7 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Usp35M0QWN7 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
Usp35M0QWN7 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Usp35M0QWN7 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Usp35M0QWN7 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
Usp35M0QWN7 CT025689.6-201ENSMUST00000224991 1104 ntBASIC20.33■□□□□ 0.85
Usp35M0QWN7 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Usp35M0QWN7 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Usp35M0QWN7 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Usp35M0QWN7 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Usp35M0QWN7 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Usp35M0QWN7 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.84
Usp35M0QWN7 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Usp35M0QWN7 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Usp35M0QWN7 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Usp35M0QWN7 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Usp35M0QWN7 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Usp35M0QWN7 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Usp35M0QWN7 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Usp35M0QWN7 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
Usp35M0QWN7 Gm12933-201ENSMUST00000120203 872 ntBASIC20.32■□□□□ 0.84
Usp35M0QWN7 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Usp35M0QWN7 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Usp35M0QWN7 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC20.32■□□□□ 0.84
Usp35M0QWN7 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Usp35M0QWN7 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Usp35M0QWN7 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC20.32■□□□□ 0.84
Usp35M0QWN7 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Usp35M0QWN7 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Usp35M0QWN7 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Usp35M0QWN7 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Usp35M0QWN7 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC20.31■□□□□ 0.84
Usp35M0QWN7 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Usp35M0QWN7 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Usp35M0QWN7 Gm10602-201ENSMUST00000098239 609 ntBASIC20.31■□□□□ 0.84
Usp35M0QWN7 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Usp35M0QWN7 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Usp35M0QWN7 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC20.31■□□□□ 0.84
Usp35M0QWN7 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Usp35M0QWN7 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Usp35M0QWN7 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Usp35M0QWN7 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC20.3■□□□□ 0.84
Usp35M0QWN7 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Usp35M0QWN7 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC20.3■□□□□ 0.84
Usp35M0QWN7 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Usp35M0QWN7 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Usp35M0QWN7 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC20.3■□□□□ 0.84
Usp35M0QWN7 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Usp35M0QWN7 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Usp35M0QWN7 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Usp35M0QWN7 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Usp35M0QWN7 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC20.29■□□□□ 0.84
Usp35M0QWN7 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Usp35M0QWN7 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Usp35M0QWN7 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC20.29■□□□□ 0.84
Usp35M0QWN7 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC20.29■□□□□ 0.84
Usp35M0QWN7 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC20.29■□□□□ 0.84
Usp35M0QWN7 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Usp35M0QWN7 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Usp35M0QWN7 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Usp35M0QWN7 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC20.29■□□□□ 0.84
Usp35M0QWN7 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Usp35M0QWN7 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC20.28■□□□□ 0.84
Usp35M0QWN7 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Usp35M0QWN7 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC20.28■□□□□ 0.84
Usp35M0QWN7 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Usp35M0QWN7 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC20.28■□□□□ 0.84
Usp35M0QWN7 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Usp35M0QWN7 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Usp35M0QWN7 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC20.28■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 16.5 ms