Protein–RNA interactions for Protein: J3QP07

B020004C17Rik, RIKEN cDNA B020004C17 gene, mousemouse

Predictions only

Length 232 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
B020004C17RikJ3QP07 Gm20100-201ENSMUST00000209418 2272 ntBASIC21.48■■□□□ 1.03
B020004C17RikJ3QP07 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
B020004C17RikJ3QP07 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
B020004C17RikJ3QP07 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
B020004C17RikJ3QP07 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC21.47■■□□□ 1.03
B020004C17RikJ3QP07 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
B020004C17RikJ3QP07 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
B020004C17RikJ3QP07 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
B020004C17RikJ3QP07 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC21.47■■□□□ 1.03
B020004C17RikJ3QP07 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
B020004C17RikJ3QP07 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
B020004C17RikJ3QP07 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC21.47■■□□□ 1.03
B020004C17RikJ3QP07 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC21.47■■□□□ 1.03
B020004C17RikJ3QP07 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
B020004C17RikJ3QP07 Gm715-201ENSMUST00000117865 831 ntBASIC21.46■■□□□ 1.03
B020004C17RikJ3QP07 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC21.46■■□□□ 1.03
B020004C17RikJ3QP07 AC135963.1-201ENSMUST00000211640 717 ntBASIC21.46■■□□□ 1.03
B020004C17RikJ3QP07 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
B020004C17RikJ3QP07 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC21.46■■□□□ 1.03
B020004C17RikJ3QP07 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
B020004C17RikJ3QP07 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC21.45■■□□□ 1.03
B020004C17RikJ3QP07 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
B020004C17RikJ3QP07 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
B020004C17RikJ3QP07 Gm13836-201ENSMUST00000121159 501 ntBASIC21.45■■□□□ 1.02
B020004C17RikJ3QP07 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC21.45■■□□□ 1.02
B020004C17RikJ3QP07 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
B020004C17RikJ3QP07 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
B020004C17RikJ3QP07 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
B020004C17RikJ3QP07 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
B020004C17RikJ3QP07 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
B020004C17RikJ3QP07 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
B020004C17RikJ3QP07 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
B020004C17RikJ3QP07 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
B020004C17RikJ3QP07 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
B020004C17RikJ3QP07 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC21.45■■□□□ 1.02
B020004C17RikJ3QP07 Nrn1-203ENSMUST00000223611 1443 ntBASIC21.45■■□□□ 1.02
B020004C17RikJ3QP07 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
B020004C17RikJ3QP07 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
B020004C17RikJ3QP07 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
B020004C17RikJ3QP07 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
B020004C17RikJ3QP07 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
B020004C17RikJ3QP07 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
B020004C17RikJ3QP07 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
B020004C17RikJ3QP07 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
B020004C17RikJ3QP07 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
B020004C17RikJ3QP07 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
B020004C17RikJ3QP07 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
B020004C17RikJ3QP07 Gm43672-201ENSMUST00000199072 1731 ntBASIC21.43■■□□□ 1.02
B020004C17RikJ3QP07 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC21.43■■□□□ 1.02
B020004C17RikJ3QP07 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
B020004C17RikJ3QP07 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
B020004C17RikJ3QP07 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC21.43■■□□□ 1.02
B020004C17RikJ3QP07 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
B020004C17RikJ3QP07 Gm10698-201ENSMUST00000182663 604 ntBASIC21.43■■□□□ 1.02
B020004C17RikJ3QP07 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC21.43■■□□□ 1.02
B020004C17RikJ3QP07 AC153881.1-201ENSMUST00000214448 284 ntBASIC21.43■■□□□ 1.02
B020004C17RikJ3QP07 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
B020004C17RikJ3QP07 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
B020004C17RikJ3QP07 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC21.43■■□□□ 1.02
B020004C17RikJ3QP07 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC21.43■■□□□ 1.02
B020004C17RikJ3QP07 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC21.42■■□□□ 1.02
B020004C17RikJ3QP07 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
B020004C17RikJ3QP07 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC21.42■■□□□ 1.02
B020004C17RikJ3QP07 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
B020004C17RikJ3QP07 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
B020004C17RikJ3QP07 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
B020004C17RikJ3QP07 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
B020004C17RikJ3QP07 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
B020004C17RikJ3QP07 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
B020004C17RikJ3QP07 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
B020004C17RikJ3QP07 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
B020004C17RikJ3QP07 Gm15378-201ENSMUST00000121894 207 ntBASIC21.41■■□□□ 1.02
B020004C17RikJ3QP07 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
B020004C17RikJ3QP07 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC21.41■■□□□ 1.02
B020004C17RikJ3QP07 Gm29994-201ENSMUST00000195495 1193 ntBASIC21.41■■□□□ 1.02
B020004C17RikJ3QP07 AL672049.1-201ENSMUST00000197943 91 ntBASIC21.41■■□□□ 1.02
B020004C17RikJ3QP07 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
B020004C17RikJ3QP07 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
B020004C17RikJ3QP07 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
B020004C17RikJ3QP07 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
B020004C17RikJ3QP07 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
B020004C17RikJ3QP07 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
B020004C17RikJ3QP07 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC21.4■■□□□ 1.02
B020004C17RikJ3QP07 Gm2399-201ENSMUST00000104944 225 ntBASIC21.4■■□□□ 1.02
B020004C17RikJ3QP07 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC21.4■■□□□ 1.02
B020004C17RikJ3QP07 Gm19094-201ENSMUST00000209791 1246 ntBASIC21.4■■□□□ 1.02
B020004C17RikJ3QP07 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
B020004C17RikJ3QP07 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
B020004C17RikJ3QP07 Gm17641-201ENSMUST00000166328 2350 ntBASIC21.4■■□□□ 1.02
B020004C17RikJ3QP07 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
B020004C17RikJ3QP07 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
B020004C17RikJ3QP07 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC21.39■■□□□ 1.02
B020004C17RikJ3QP07 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
B020004C17RikJ3QP07 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC21.39■■□□□ 1.01
B020004C17RikJ3QP07 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.01
B020004C17RikJ3QP07 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
B020004C17RikJ3QP07 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.01
B020004C17RikJ3QP07 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
B020004C17RikJ3QP07 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC21.38■■□□□ 1.01
B020004C17RikJ3QP07 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC21.38■■□□□ 1.01
Retrieved 100 of 76,532 protein–RNA pairs in 17.1 ms