Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC19.38■□□□□ 0.69
Col6a3E9PWQ3 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Col6a3E9PWQ3 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Col6a3E9PWQ3 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Col6a3E9PWQ3 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Col6a3E9PWQ3 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Col6a3E9PWQ3 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Col6a3E9PWQ3 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Col6a3E9PWQ3 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC19.38■□□□□ 0.69
Col6a3E9PWQ3 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Col6a3E9PWQ3 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Col6a3E9PWQ3 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Col6a3E9PWQ3 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Col6a3E9PWQ3 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Col6a3E9PWQ3 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC19.37■□□□□ 0.69
Col6a3E9PWQ3 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Col6a3E9PWQ3 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Col6a3E9PWQ3 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Col6a3E9PWQ3 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Col6a3E9PWQ3 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Col6a3E9PWQ3 Gm17661-201ENSMUST00000170317 270 ntBASIC19.37■□□□□ 0.69
Col6a3E9PWQ3 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Col6a3E9PWQ3 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Col6a3E9PWQ3 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Col6a3E9PWQ3 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Col6a3E9PWQ3 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC19.36■□□□□ 0.69
Col6a3E9PWQ3 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Col6a3E9PWQ3 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Col6a3E9PWQ3 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Col6a3E9PWQ3 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Col6a3E9PWQ3 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Col6a3E9PWQ3 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Col6a3E9PWQ3 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Col6a3E9PWQ3 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Col6a3E9PWQ3 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Col6a3E9PWQ3 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Col6a3E9PWQ3 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Col6a3E9PWQ3 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Col6a3E9PWQ3 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Col6a3E9PWQ3 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Col6a3E9PWQ3 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Col6a3E9PWQ3 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Col6a3E9PWQ3 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Col6a3E9PWQ3 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Col6a3E9PWQ3 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Col6a3E9PWQ3 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Col6a3E9PWQ3 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Col6a3E9PWQ3 Mir6236-201ENSMUST00000184437 123 ntBASIC19.34■□□□□ 0.69
Col6a3E9PWQ3 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Col6a3E9PWQ3 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Col6a3E9PWQ3 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Col6a3E9PWQ3 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Col6a3E9PWQ3 Gm18959-201ENSMUST00000208954 655 ntBASIC19.34■□□□□ 0.69
Col6a3E9PWQ3 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Col6a3E9PWQ3 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Col6a3E9PWQ3 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Col6a3E9PWQ3 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC19.33■□□□□ 0.69
Col6a3E9PWQ3 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Col6a3E9PWQ3 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC19.33■□□□□ 0.68
Col6a3E9PWQ3 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC19.33■□□□□ 0.68
Col6a3E9PWQ3 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Col6a3E9PWQ3 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
Col6a3E9PWQ3 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC19.33■□□□□ 0.68
Col6a3E9PWQ3 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Col6a3E9PWQ3 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Col6a3E9PWQ3 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Col6a3E9PWQ3 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Col6a3E9PWQ3 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Col6a3E9PWQ3 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Col6a3E9PWQ3 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Col6a3E9PWQ3 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC19.32■□□□□ 0.68
Col6a3E9PWQ3 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Col6a3E9PWQ3 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Col6a3E9PWQ3 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Col6a3E9PWQ3 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Col6a3E9PWQ3 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Col6a3E9PWQ3 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Col6a3E9PWQ3 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC19.31■□□□□ 0.68
Col6a3E9PWQ3 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Col6a3E9PWQ3 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
Col6a3E9PWQ3 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Col6a3E9PWQ3 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Col6a3E9PWQ3 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Col6a3E9PWQ3 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Col6a3E9PWQ3 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Col6a3E9PWQ3 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC19.31■□□□□ 0.68
Col6a3E9PWQ3 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC19.31■□□□□ 0.68
Col6a3E9PWQ3 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Col6a3E9PWQ3 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Col6a3E9PWQ3 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Col6a3E9PWQ3 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Col6a3E9PWQ3 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC19.3■□□□□ 0.68
Col6a3E9PWQ3 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Col6a3E9PWQ3 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Col6a3E9PWQ3 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Col6a3E9PWQ3 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Col6a3E9PWQ3 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Col6a3E9PWQ3 Gm3375-201ENSMUST00000203929 796 ntBASIC19.3■□□□□ 0.68
Col6a3E9PWQ3 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Col6a3E9PWQ3 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms