Protein–RNA interactions for Protein: C0HKE4

Hist1h2ae, Histone H2A type 1-E, mousemouse

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h2aeC0HKE4 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Hist1h2aeC0HKE4 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Hist1h2aeC0HKE4 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC17.39■□□□□ 0.37
Hist1h2aeC0HKE4 Serp2-204ENSMUST00000228055 705 ntBASIC17.39■□□□□ 0.37
Hist1h2aeC0HKE4 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Hist1h2aeC0HKE4 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Hist1h2aeC0HKE4 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Hist1h2aeC0HKE4 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Hist1h2aeC0HKE4 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Hist1h2aeC0HKE4 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Hist1h2aeC0HKE4 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Hist1h2aeC0HKE4 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Hist1h2aeC0HKE4 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Hist1h2aeC0HKE4 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Hist1h2aeC0HKE4 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Hist1h2aeC0HKE4 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Hist1h2aeC0HKE4 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Hist1h2aeC0HKE4 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Hist1h2aeC0HKE4 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Hist1h2aeC0HKE4 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Hist1h2aeC0HKE4 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Hist1h2aeC0HKE4 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Hist1h2aeC0HKE4 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Hist1h2aeC0HKE4 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Hist1h2aeC0HKE4 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Hist1h2aeC0HKE4 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Hist1h2aeC0HKE4 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC17.37■□□□□ 0.37
Hist1h2aeC0HKE4 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Hist1h2aeC0HKE4 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Hist1h2aeC0HKE4 Gm10571-201ENSMUST00000097869 1638 ntBASIC17.37■□□□□ 0.37
Hist1h2aeC0HKE4 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Hist1h2aeC0HKE4 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Hist1h2aeC0HKE4 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Hist1h2aeC0HKE4 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Hist1h2aeC0HKE4 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC17.37■□□□□ 0.37
Hist1h2aeC0HKE4 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Hist1h2aeC0HKE4 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC17.37■□□□□ 0.37
Hist1h2aeC0HKE4 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC17.37■□□□□ 0.37
Hist1h2aeC0HKE4 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Hist1h2aeC0HKE4 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Hist1h2aeC0HKE4 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Hist1h2aeC0HKE4 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Hist1h2aeC0HKE4 Gm10461-201ENSMUST00000202073 4786 ntBASIC17.36■□□□□ 0.37
Hist1h2aeC0HKE4 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Hist1h2aeC0HKE4 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Hist1h2aeC0HKE4 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC17.36■□□□□ 0.37
Hist1h2aeC0HKE4 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
Hist1h2aeC0HKE4 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Hist1h2aeC0HKE4 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Hist1h2aeC0HKE4 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Hist1h2aeC0HKE4 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Hist1h2aeC0HKE4 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC17.36■□□□□ 0.37
Hist1h2aeC0HKE4 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Hist1h2aeC0HKE4 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Hist1h2aeC0HKE4 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Hist1h2aeC0HKE4 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Hist1h2aeC0HKE4 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Hist1h2aeC0HKE4 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC17.35■□□□□ 0.37
Hist1h2aeC0HKE4 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Hist1h2aeC0HKE4 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Hist1h2aeC0HKE4 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC17.35■□□□□ 0.37
Hist1h2aeC0HKE4 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Hist1h2aeC0HKE4 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC17.35■□□□□ 0.37
Hist1h2aeC0HKE4 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Hist1h2aeC0HKE4 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC17.35■□□□□ 0.37
Hist1h2aeC0HKE4 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Hist1h2aeC0HKE4 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC17.35■□□□□ 0.37
Hist1h2aeC0HKE4 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Hist1h2aeC0HKE4 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC17.35■□□□□ 0.37
Hist1h2aeC0HKE4 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Hist1h2aeC0HKE4 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Hist1h2aeC0HKE4 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Hist1h2aeC0HKE4 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Hist1h2aeC0HKE4 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Hist1h2aeC0HKE4 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Hist1h2aeC0HKE4 Gm12821-201ENSMUST00000120022 600 ntBASIC17.34■□□□□ 0.37
Hist1h2aeC0HKE4 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Hist1h2aeC0HKE4 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC17.34■□□□□ 0.37
Hist1h2aeC0HKE4 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC17.34■□□□□ 0.37
Hist1h2aeC0HKE4 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Hist1h2aeC0HKE4 Gm21956-201ENSMUST00000179946 522 ntBASIC17.34■□□□□ 0.37
Hist1h2aeC0HKE4 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Hist1h2aeC0HKE4 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Hist1h2aeC0HKE4 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Hist1h2aeC0HKE4 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC17.34■□□□□ 0.37
Hist1h2aeC0HKE4 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Hist1h2aeC0HKE4 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Hist1h2aeC0HKE4 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC17.34■□□□□ 0.37
Hist1h2aeC0HKE4 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Hist1h2aeC0HKE4 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Hist1h2aeC0HKE4 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Hist1h2aeC0HKE4 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Hist1h2aeC0HKE4 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Hist1h2aeC0HKE4 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Hist1h2aeC0HKE4 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Hist1h2aeC0HKE4 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Hist1h2aeC0HKE4 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Hist1h2aeC0HKE4 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Hist1h2aeC0HKE4 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Hist1h2aeC0HKE4 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms