Protein–RNA interactions for Protein: B1AWN9

Tnfrsf25, Tumor necrosis factor receptor superfamily, member 25, mousemouse

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf25B1AWN9 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Tnfrsf25B1AWN9 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Tnfrsf25B1AWN9 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Tnfrsf25B1AWN9 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC18.39■□□□□ 0.53
Tnfrsf25B1AWN9 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Tnfrsf25B1AWN9 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC18.39■□□□□ 0.53
Tnfrsf25B1AWN9 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC18.39■□□□□ 0.53
Tnfrsf25B1AWN9 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Tnfrsf25B1AWN9 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Tnfrsf25B1AWN9 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Tnfrsf25B1AWN9 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Tnfrsf25B1AWN9 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC18.39■□□□□ 0.53
Tnfrsf25B1AWN9 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Tnfrsf25B1AWN9 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Tnfrsf25B1AWN9 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Tnfrsf25B1AWN9 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Tnfrsf25B1AWN9 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Tnfrsf25B1AWN9 AC154266.1-201ENSMUST00000223190 503 ntBASIC18.38■□□□□ 0.53
Tnfrsf25B1AWN9 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Tnfrsf25B1AWN9 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Tnfrsf25B1AWN9 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Tnfrsf25B1AWN9 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC18.38■□□□□ 0.53
Tnfrsf25B1AWN9 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Tnfrsf25B1AWN9 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Tnfrsf25B1AWN9 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Tnfrsf25B1AWN9 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Tnfrsf25B1AWN9 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Tnfrsf25B1AWN9 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Tnfrsf25B1AWN9 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Tnfrsf25B1AWN9 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Tnfrsf25B1AWN9 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Tnfrsf25B1AWN9 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Tnfrsf25B1AWN9 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Tnfrsf25B1AWN9 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Tnfrsf25B1AWN9 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Tnfrsf25B1AWN9 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Tnfrsf25B1AWN9 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Tnfrsf25B1AWN9 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Tnfrsf25B1AWN9 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Tnfrsf25B1AWN9 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Tnfrsf25B1AWN9 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC18.36■□□□□ 0.53
Tnfrsf25B1AWN9 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Tnfrsf25B1AWN9 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Tnfrsf25B1AWN9 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Tnfrsf25B1AWN9 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Tnfrsf25B1AWN9 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Tnfrsf25B1AWN9 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Tnfrsf25B1AWN9 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Tnfrsf25B1AWN9 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Tnfrsf25B1AWN9 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Tnfrsf25B1AWN9 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Tnfrsf25B1AWN9 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Tnfrsf25B1AWN9 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Tnfrsf25B1AWN9 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
Tnfrsf25B1AWN9 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Tnfrsf25B1AWN9 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Tnfrsf25B1AWN9 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Tnfrsf25B1AWN9 AC164629.5-201ENSMUST00000220387 632 ntBASIC18.35■□□□□ 0.53
Tnfrsf25B1AWN9 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
Tnfrsf25B1AWN9 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Tnfrsf25B1AWN9 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Tnfrsf25B1AWN9 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC18.35■□□□□ 0.53
Tnfrsf25B1AWN9 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Tnfrsf25B1AWN9 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Tnfrsf25B1AWN9 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Tnfrsf25B1AWN9 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Tnfrsf25B1AWN9 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Tnfrsf25B1AWN9 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Tnfrsf25B1AWN9 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC18.34■□□□□ 0.53
Tnfrsf25B1AWN9 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Tnfrsf25B1AWN9 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Tnfrsf25B1AWN9 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Tnfrsf25B1AWN9 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Tnfrsf25B1AWN9 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Tnfrsf25B1AWN9 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC18.34■□□□□ 0.53
Tnfrsf25B1AWN9 Gm43909-201ENSMUST00000203443 1876 ntBASIC18.33■□□□□ 0.53
Tnfrsf25B1AWN9 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
Tnfrsf25B1AWN9 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
Tnfrsf25B1AWN9 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Tnfrsf25B1AWN9 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Tnfrsf25B1AWN9 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Tnfrsf25B1AWN9 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Tnfrsf25B1AWN9 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
Tnfrsf25B1AWN9 Gm26571-201ENSMUST00000181399 666 ntBASIC18.33■□□□□ 0.52
Tnfrsf25B1AWN9 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC18.33■□□□□ 0.52
Tnfrsf25B1AWN9 Gm7291-201ENSMUST00000199147 382 ntBASIC18.33■□□□□ 0.52
Tnfrsf25B1AWN9 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC18.33■□□□□ 0.52
Tnfrsf25B1AWN9 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC18.33■□□□□ 0.52
Tnfrsf25B1AWN9 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
Tnfrsf25B1AWN9 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Tnfrsf25B1AWN9 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Tnfrsf25B1AWN9 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Tnfrsf25B1AWN9 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Tnfrsf25B1AWN9 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Tnfrsf25B1AWN9 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
Tnfrsf25B1AWN9 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Tnfrsf25B1AWN9 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Tnfrsf25B1AWN9 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Tnfrsf25B1AWN9 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Tnfrsf25B1AWN9 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms