Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Col4a6B1AVK5 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
Col4a6B1AVK5 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Col4a6B1AVK5 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Col4a6B1AVK5 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Col4a6B1AVK5 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Col4a6B1AVK5 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC19.91■□□□□ 0.78
Col4a6B1AVK5 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Col4a6B1AVK5 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
Col4a6B1AVK5 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC19.9■□□□□ 0.78
Col4a6B1AVK5 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Col4a6B1AVK5 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
Col4a6B1AVK5 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC19.9■□□□□ 0.78
Col4a6B1AVK5 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Col4a6B1AVK5 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
Col4a6B1AVK5 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Col4a6B1AVK5 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC19.89■□□□□ 0.78
Col4a6B1AVK5 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Col4a6B1AVK5 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.78
Col4a6B1AVK5 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC19.89■□□□□ 0.78
Col4a6B1AVK5 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Col4a6B1AVK5 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Col4a6B1AVK5 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
Col4a6B1AVK5 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Col4a6B1AVK5 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC19.89■□□□□ 0.77
Col4a6B1AVK5 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
Col4a6B1AVK5 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC19.89■□□□□ 0.77
Col4a6B1AVK5 Arhgef33-211ENSMUST00000225658 473 ntBASIC19.89■□□□□ 0.77
Col4a6B1AVK5 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Col4a6B1AVK5 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC19.89■□□□□ 0.77
Col4a6B1AVK5 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Col4a6B1AVK5 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Col4a6B1AVK5 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Col4a6B1AVK5 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Col4a6B1AVK5 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Col4a6B1AVK5 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Col4a6B1AVK5 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Col4a6B1AVK5 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Col4a6B1AVK5 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Col4a6B1AVK5 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Col4a6B1AVK5 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Col4a6B1AVK5 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Col4a6B1AVK5 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Col4a6B1AVK5 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Col4a6B1AVK5 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Col4a6B1AVK5 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Col4a6B1AVK5 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC19.88■□□□□ 0.77
Col4a6B1AVK5 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Col4a6B1AVK5 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
Col4a6B1AVK5 Gm18666-201ENSMUST00000190039 958 ntBASIC19.87■□□□□ 0.77
Col4a6B1AVK5 AC163280.1-201ENSMUST00000228194 1100 ntBASIC19.87■□□□□ 0.77
Col4a6B1AVK5 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Col4a6B1AVK5 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC19.87■□□□□ 0.77
Col4a6B1AVK5 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
Col4a6B1AVK5 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Col4a6B1AVK5 Gm43006-201ENSMUST00000197702 1602 ntBASIC19.87■□□□□ 0.77
Col4a6B1AVK5 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Col4a6B1AVK5 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Col4a6B1AVK5 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Col4a6B1AVK5 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC19.87■□□□□ 0.77
Col4a6B1AVK5 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC19.87■□□□□ 0.77
Col4a6B1AVK5 AC140264.2-202ENSMUST00000218746 817 ntBASIC19.87■□□□□ 0.77
Col4a6B1AVK5 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
Col4a6B1AVK5 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Col4a6B1AVK5 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Col4a6B1AVK5 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Col4a6B1AVK5 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Col4a6B1AVK5 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Col4a6B1AVK5 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Col4a6B1AVK5 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Col4a6B1AVK5 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC19.86■□□□□ 0.77
Col4a6B1AVK5 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Col4a6B1AVK5 Gm15565-201ENSMUST00000118890 427 ntBASIC19.86■□□□□ 0.77
Col4a6B1AVK5 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
Col4a6B1AVK5 Krtap5-1-202ENSMUST00000188274 742 ntBASIC19.86■□□□□ 0.77
Col4a6B1AVK5 Gm37055-201ENSMUST00000191866 133 ntBASIC19.86■□□□□ 0.77
Col4a6B1AVK5 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC19.86■□□□□ 0.77
Col4a6B1AVK5 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
Col4a6B1AVK5 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
Col4a6B1AVK5 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Col4a6B1AVK5 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC19.85■□□□□ 0.77
Col4a6B1AVK5 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC19.85■□□□□ 0.77
Col4a6B1AVK5 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC19.85■□□□□ 0.77
Col4a6B1AVK5 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC19.85■□□□□ 0.77
Col4a6B1AVK5 Gm19094-201ENSMUST00000209791 1246 ntBASIC19.85■□□□□ 0.77
Col4a6B1AVK5 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Col4a6B1AVK5 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Col4a6B1AVK5 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
Col4a6B1AVK5 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Col4a6B1AVK5 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Col4a6B1AVK5 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Col4a6B1AVK5 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Col4a6B1AVK5 Gm10167-201ENSMUST00000150411 1479 ntBASIC19.85■□□□□ 0.77
Col4a6B1AVK5 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC19.85■□□□□ 0.77
Col4a6B1AVK5 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC19.85■□□□□ 0.77
Col4a6B1AVK5 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Col4a6B1AVK5 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Col4a6B1AVK5 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC19.85■□□□□ 0.77
Col4a6B1AVK5 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Col4a6B1AVK5 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC19.84■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms