Protein–RNA interactions for Protein: A3KFM7

Chd6, Chromodomain-helicase-DNA-binding protein 6, mousemouse

Predictions only

Length 2,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd6A3KFM7 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC15.68■□□□□ 0.1
Chd6A3KFM7 AC154621.1-201ENSMUST00000226155 1119 ntBASIC15.68■□□□□ 0.1
Chd6A3KFM7 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Chd6A3KFM7 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC15.68■□□□□ 0.1
Chd6A3KFM7 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Chd6A3KFM7 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC15.67■□□□□ 0.1
Chd6A3KFM7 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC15.67■□□□□ 0.1
Chd6A3KFM7 Gm16042-201ENSMUST00000204813 1247 ntBASIC15.67■□□□□ 0.1
Chd6A3KFM7 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Chd6A3KFM7 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Chd6A3KFM7 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Chd6A3KFM7 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Chd6A3KFM7 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Chd6A3KFM7 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Chd6A3KFM7 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Chd6A3KFM7 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC15.67■□□□□ 0.1
Chd6A3KFM7 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Chd6A3KFM7 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Chd6A3KFM7 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Chd6A3KFM7 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Chd6A3KFM7 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Chd6A3KFM7 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Chd6A3KFM7 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Chd6A3KFM7 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Chd6A3KFM7 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Chd6A3KFM7 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Chd6A3KFM7 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Chd6A3KFM7 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Chd6A3KFM7 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC15.66■□□□□ 0.1
Chd6A3KFM7 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Chd6A3KFM7 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Chd6A3KFM7 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC15.66■□□□□ 0.1
Chd6A3KFM7 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Chd6A3KFM7 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC15.65■□□□□ 0.1
Chd6A3KFM7 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Chd6A3KFM7 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC15.65■□□□□ 0.1
Chd6A3KFM7 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC15.65■□□□□ 0.1
Chd6A3KFM7 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Chd6A3KFM7 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Chd6A3KFM7 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Chd6A3KFM7 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Chd6A3KFM7 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Chd6A3KFM7 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Chd6A3KFM7 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Chd6A3KFM7 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Chd6A3KFM7 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC15.64■□□□□ 0.09
Chd6A3KFM7 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Chd6A3KFM7 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Chd6A3KFM7 Gm21814-202ENSMUST00000203277 873 ntBASIC15.64■□□□□ 0.09
Chd6A3KFM7 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Chd6A3KFM7 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Chd6A3KFM7 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Chd6A3KFM7 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Chd6A3KFM7 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Chd6A3KFM7 AC107452.1-201ENSMUST00000227963 481 ntBASIC15.64■□□□□ 0.09
Chd6A3KFM7 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Chd6A3KFM7 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC15.64■□□□□ 0.09
Chd6A3KFM7 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Chd6A3KFM7 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
Chd6A3KFM7 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC15.63■□□□□ 0.09
Chd6A3KFM7 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC15.63■□□□□ 0.09
Chd6A3KFM7 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Chd6A3KFM7 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC15.63■□□□□ 0.09
Chd6A3KFM7 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Chd6A3KFM7 Gm6190-201ENSMUST00000220683 1374 ntBASIC15.63■□□□□ 0.09
Chd6A3KFM7 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Chd6A3KFM7 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Chd6A3KFM7 Gm13158-201ENSMUST00000122007 736 ntBASIC15.63■□□□□ 0.09
Chd6A3KFM7 Mzt1-203ENSMUST00000227948 952 ntBASIC15.63■□□□□ 0.09
Chd6A3KFM7 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Chd6A3KFM7 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Chd6A3KFM7 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC15.62■□□□□ 0.09
Chd6A3KFM7 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Chd6A3KFM7 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC15.62■□□□□ 0.09
Chd6A3KFM7 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC15.62■□□□□ 0.09
Chd6A3KFM7 Gm5712-201ENSMUST00000199748 1043 ntBASIC15.62■□□□□ 0.09
Chd6A3KFM7 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC15.62■□□□□ 0.09
Chd6A3KFM7 AW822252-206ENSMUST00000208904 237 ntBASIC15.62■□□□□ 0.09
Chd6A3KFM7 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC15.62■□□□□ 0.09
Chd6A3KFM7 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Chd6A3KFM7 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Chd6A3KFM7 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
Chd6A3KFM7 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Chd6A3KFM7 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Chd6A3KFM7 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC15.62■□□□□ 0.09
Chd6A3KFM7 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Chd6A3KFM7 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Chd6A3KFM7 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Chd6A3KFM7 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Chd6A3KFM7 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Chd6A3KFM7 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Chd6A3KFM7 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC15.61■□□□□ 0.09
Chd6A3KFM7 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Chd6A3KFM7 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Chd6A3KFM7 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC15.61■□□□□ 0.09
Chd6A3KFM7 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Chd6A3KFM7 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC15.61■□□□□ 0.09
Chd6A3KFM7 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Chd6A3KFM7 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Chd6A3KFM7 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC15.61■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 16.8 ms