Protein–RNA interactions for Protein: A1L3P4

Slc9a6, Sodium/hydrogen exchanger, mousemouse

Predictions only

Length 702 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc9a6A1L3P4 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Slc9a6A1L3P4 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Slc9a6A1L3P4 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Slc9a6A1L3P4 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Slc9a6A1L3P4 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Slc9a6A1L3P4 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Slc9a6A1L3P4 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC17.86■□□□□ 0.45
Slc9a6A1L3P4 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Slc9a6A1L3P4 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Slc9a6A1L3P4 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC17.86■□□□□ 0.45
Slc9a6A1L3P4 AC137127.1-201ENSMUST00000213466 1078 ntBASIC17.86■□□□□ 0.45
Slc9a6A1L3P4 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Slc9a6A1L3P4 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Slc9a6A1L3P4 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Slc9a6A1L3P4 Gm45640-201ENSMUST00000210665 1896 ntBASIC17.86■□□□□ 0.45
Slc9a6A1L3P4 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Slc9a6A1L3P4 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Slc9a6A1L3P4 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Slc9a6A1L3P4 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Slc9a6A1L3P4 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Slc9a6A1L3P4 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Slc9a6A1L3P4 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC17.85■□□□□ 0.45
Slc9a6A1L3P4 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Slc9a6A1L3P4 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Slc9a6A1L3P4 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Slc9a6A1L3P4 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Slc9a6A1L3P4 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Slc9a6A1L3P4 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Slc9a6A1L3P4 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Slc9a6A1L3P4 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC17.84■□□□□ 0.45
Slc9a6A1L3P4 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Slc9a6A1L3P4 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Slc9a6A1L3P4 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Slc9a6A1L3P4 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Slc9a6A1L3P4 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Slc9a6A1L3P4 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Slc9a6A1L3P4 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC17.84■□□□□ 0.45
Slc9a6A1L3P4 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC17.84■□□□□ 0.45
Slc9a6A1L3P4 Gm43017-201ENSMUST00000198296 752 ntBASIC17.84■□□□□ 0.45
Slc9a6A1L3P4 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Slc9a6A1L3P4 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC17.84■□□□□ 0.45
Slc9a6A1L3P4 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Slc9a6A1L3P4 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Slc9a6A1L3P4 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
Slc9a6A1L3P4 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Slc9a6A1L3P4 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Slc9a6A1L3P4 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Slc9a6A1L3P4 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
Slc9a6A1L3P4 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Slc9a6A1L3P4 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Slc9a6A1L3P4 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
Slc9a6A1L3P4 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Slc9a6A1L3P4 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Slc9a6A1L3P4 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
Slc9a6A1L3P4 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
Slc9a6A1L3P4 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
Slc9a6A1L3P4 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Slc9a6A1L3P4 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC17.82■□□□□ 0.44
Slc9a6A1L3P4 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Slc9a6A1L3P4 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Slc9a6A1L3P4 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC17.82■□□□□ 0.44
Slc9a6A1L3P4 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Slc9a6A1L3P4 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Slc9a6A1L3P4 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Slc9a6A1L3P4 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Slc9a6A1L3P4 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC17.82■□□□□ 0.44
Slc9a6A1L3P4 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Slc9a6A1L3P4 Gm32699-201ENSMUST00000221728 1988 ntBASIC17.82■□□□□ 0.44
Slc9a6A1L3P4 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Slc9a6A1L3P4 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Slc9a6A1L3P4 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Slc9a6A1L3P4 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Slc9a6A1L3P4 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Slc9a6A1L3P4 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC17.81■□□□□ 0.44
Slc9a6A1L3P4 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC17.81■□□□□ 0.44
Slc9a6A1L3P4 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Slc9a6A1L3P4 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Slc9a6A1L3P4 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Slc9a6A1L3P4 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Slc9a6A1L3P4 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC17.81■□□□□ 0.44
Slc9a6A1L3P4 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC17.81■□□□□ 0.44
Slc9a6A1L3P4 Gm26833-201ENSMUST00000180899 440 ntBASIC17.81■□□□□ 0.44
Slc9a6A1L3P4 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Slc9a6A1L3P4 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC17.81■□□□□ 0.44
Slc9a6A1L3P4 Gm40848-201ENSMUST00000221998 324 ntBASIC17.81■□□□□ 0.44
Slc9a6A1L3P4 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Slc9a6A1L3P4 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Slc9a6A1L3P4 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Slc9a6A1L3P4 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Slc9a6A1L3P4 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Slc9a6A1L3P4 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Slc9a6A1L3P4 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Slc9a6A1L3P4 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Slc9a6A1L3P4 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Slc9a6A1L3P4 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Slc9a6A1L3P4 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Slc9a6A1L3P4 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Slc9a6A1L3P4 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Slc9a6A1L3P4 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Slc9a6A1L3P4 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms