Protein–RNA interactions for Protein: A0AUP1

Ccdc112, Coiled-coil domain-containing protein 112, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc112A0AUP1 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC21.73■■□□□ 1.07
Ccdc112A0AUP1 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Ccdc112A0AUP1 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC21.73■■□□□ 1.07
Ccdc112A0AUP1 Gm43137-201ENSMUST00000198052 594 ntBASIC21.73■■□□□ 1.07
Ccdc112A0AUP1 Gm38342-201ENSMUST00000195710 2980 ntBASIC21.73■■□□□ 1.07
Ccdc112A0AUP1 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Ccdc112A0AUP1 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Ccdc112A0AUP1 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Ccdc112A0AUP1 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
Ccdc112A0AUP1 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Ccdc112A0AUP1 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Ccdc112A0AUP1 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Ccdc112A0AUP1 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Ccdc112A0AUP1 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Ccdc112A0AUP1 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Ccdc112A0AUP1 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Ccdc112A0AUP1 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Ccdc112A0AUP1 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC21.72■■□□□ 1.07
Ccdc112A0AUP1 Gm7160-202ENSMUST00000188519 1027 ntBASIC21.72■■□□□ 1.07
Ccdc112A0AUP1 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
Ccdc112A0AUP1 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Ccdc112A0AUP1 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Ccdc112A0AUP1 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Ccdc112A0AUP1 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC21.71■■□□□ 1.07
Ccdc112A0AUP1 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Ccdc112A0AUP1 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Ccdc112A0AUP1 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Ccdc112A0AUP1 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Ccdc112A0AUP1 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Ccdc112A0AUP1 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Ccdc112A0AUP1 Gm5540-201ENSMUST00000131852 1848 ntBASIC21.71■■□□□ 1.07
Ccdc112A0AUP1 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Ccdc112A0AUP1 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
Ccdc112A0AUP1 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC21.7■■□□□ 1.06
Ccdc112A0AUP1 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC21.7■■□□□ 1.06
Ccdc112A0AUP1 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Ccdc112A0AUP1 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Ccdc112A0AUP1 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Ccdc112A0AUP1 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Ccdc112A0AUP1 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
Ccdc112A0AUP1 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC21.7■■□□□ 1.06
Ccdc112A0AUP1 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Ccdc112A0AUP1 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Ccdc112A0AUP1 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Ccdc112A0AUP1 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Ccdc112A0AUP1 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Ccdc112A0AUP1 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Ccdc112A0AUP1 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Ccdc112A0AUP1 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Ccdc112A0AUP1 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC21.69■■□□□ 1.06
Ccdc112A0AUP1 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
Ccdc112A0AUP1 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Ccdc112A0AUP1 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Ccdc112A0AUP1 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Ccdc112A0AUP1 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Ccdc112A0AUP1 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
Ccdc112A0AUP1 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC21.68■■□□□ 1.06
Ccdc112A0AUP1 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC21.68■■□□□ 1.06
Ccdc112A0AUP1 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC21.68■■□□□ 1.06
Ccdc112A0AUP1 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Ccdc112A0AUP1 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC21.68■■□□□ 1.06
Ccdc112A0AUP1 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Ccdc112A0AUP1 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
Ccdc112A0AUP1 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC21.67■■□□□ 1.06
Ccdc112A0AUP1 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
Ccdc112A0AUP1 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Ccdc112A0AUP1 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Ccdc112A0AUP1 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Ccdc112A0AUP1 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Ccdc112A0AUP1 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Ccdc112A0AUP1 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
Ccdc112A0AUP1 Gm12251-201ENSMUST00000117893 792 ntBASIC21.67■■□□□ 1.06
Ccdc112A0AUP1 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Ccdc112A0AUP1 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Ccdc112A0AUP1 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
Ccdc112A0AUP1 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC21.67■■□□□ 1.06
Ccdc112A0AUP1 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Ccdc112A0AUP1 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Ccdc112A0AUP1 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
Ccdc112A0AUP1 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
Ccdc112A0AUP1 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Ccdc112A0AUP1 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Ccdc112A0AUP1 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC21.66■■□□□ 1.06
Ccdc112A0AUP1 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Ccdc112A0AUP1 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Ccdc112A0AUP1 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Ccdc112A0AUP1 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Ccdc112A0AUP1 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC21.66■■□□□ 1.06
Ccdc112A0AUP1 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
Ccdc112A0AUP1 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC21.66■■□□□ 1.06
Ccdc112A0AUP1 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Ccdc112A0AUP1 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
Ccdc112A0AUP1 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Ccdc112A0AUP1 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Ccdc112A0AUP1 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC21.65■■□□□ 1.06
Ccdc112A0AUP1 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Ccdc112A0AUP1 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Ccdc112A0AUP1 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC21.65■■□□□ 1.06
Ccdc112A0AUP1 AC165080.2-201ENSMUST00000217491 1530 ntBASIC21.65■■□□□ 1.06
Ccdc112A0AUP1 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.06
Retrieved 100 of 76,532 protein–RNA pairs in 17.5 ms