Protein–RNA interactions for Protein: A0A0G2LB96

Trbv29, T cell receptor beta, variable 29 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv29A0A0G2LB96 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trbv29A0A0G2LB96 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC15.79■□□□□ 0.12
Trbv29A0A0G2LB96 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Trbv29A0A0G2LB96 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trbv29A0A0G2LB96 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trbv29A0A0G2LB96 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trbv29A0A0G2LB96 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Trbv29A0A0G2LB96 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trbv29A0A0G2LB96 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trbv29A0A0G2LB96 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trbv29A0A0G2LB96 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC15.78■□□□□ 0.12
Trbv29A0A0G2LB96 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
Trbv29A0A0G2LB96 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trbv29A0A0G2LB96 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trbv29A0A0G2LB96 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC15.78■□□□□ 0.12
Trbv29A0A0G2LB96 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC15.78■□□□□ 0.12
Trbv29A0A0G2LB96 AC093043.1-201ENSMUST00000226700 898 ntBASIC15.78■□□□□ 0.12
Trbv29A0A0G2LB96 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trbv29A0A0G2LB96 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trbv29A0A0G2LB96 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trbv29A0A0G2LB96 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Trbv29A0A0G2LB96 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trbv29A0A0G2LB96 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trbv29A0A0G2LB96 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC15.77■□□□□ 0.12
Trbv29A0A0G2LB96 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trbv29A0A0G2LB96 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trbv29A0A0G2LB96 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trbv29A0A0G2LB96 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trbv29A0A0G2LB96 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trbv29A0A0G2LB96 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC15.77■□□□□ 0.12
Trbv29A0A0G2LB96 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC15.77■□□□□ 0.12
Trbv29A0A0G2LB96 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trbv29A0A0G2LB96 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.11
Trbv29A0A0G2LB96 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trbv29A0A0G2LB96 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trbv29A0A0G2LB96 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trbv29A0A0G2LB96 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
Trbv29A0A0G2LB96 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trbv29A0A0G2LB96 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trbv29A0A0G2LB96 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trbv29A0A0G2LB96 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trbv29A0A0G2LB96 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trbv29A0A0G2LB96 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trbv29A0A0G2LB96 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC15.76■□□□□ 0.11
Trbv29A0A0G2LB96 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trbv29A0A0G2LB96 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trbv29A0A0G2LB96 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trbv29A0A0G2LB96 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trbv29A0A0G2LB96 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Trbv29A0A0G2LB96 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trbv29A0A0G2LB96 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trbv29A0A0G2LB96 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trbv29A0A0G2LB96 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trbv29A0A0G2LB96 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trbv29A0A0G2LB96 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trbv29A0A0G2LB96 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trbv29A0A0G2LB96 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Trbv29A0A0G2LB96 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trbv29A0A0G2LB96 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trbv29A0A0G2LB96 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trbv29A0A0G2LB96 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trbv29A0A0G2LB96 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trbv29A0A0G2LB96 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trbv29A0A0G2LB96 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Trbv29A0A0G2LB96 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trbv29A0A0G2LB96 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
Trbv29A0A0G2LB96 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Trbv29A0A0G2LB96 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trbv29A0A0G2LB96 Gm45102-201ENSMUST00000207427 857 ntBASIC15.75■□□□□ 0.11
Trbv29A0A0G2LB96 Golgb1-201ENSMUST00000023534 498 ntBASIC15.75■□□□□ 0.11
Trbv29A0A0G2LB96 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trbv29A0A0G2LB96 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Trbv29A0A0G2LB96 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trbv29A0A0G2LB96 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Trbv29A0A0G2LB96 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC15.75■□□□□ 0.11
Trbv29A0A0G2LB96 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trbv29A0A0G2LB96 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trbv29A0A0G2LB96 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trbv29A0A0G2LB96 Gm5540-201ENSMUST00000131852 1848 ntBASIC15.74■□□□□ 0.11
Trbv29A0A0G2LB96 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trbv29A0A0G2LB96 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
Trbv29A0A0G2LB96 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trbv29A0A0G2LB96 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC15.74■□□□□ 0.11
Trbv29A0A0G2LB96 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trbv29A0A0G2LB96 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trbv29A0A0G2LB96 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trbv29A0A0G2LB96 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trbv29A0A0G2LB96 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trbv29A0A0G2LB96 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trbv29A0A0G2LB96 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trbv29A0A0G2LB96 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trbv29A0A0G2LB96 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC15.73■□□□□ 0.11
Trbv29A0A0G2LB96 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Trbv29A0A0G2LB96 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Trbv29A0A0G2LB96 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trbv29A0A0G2LB96 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trbv29A0A0G2LB96 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Trbv29A0A0G2LB96 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC15.73■□□□□ 0.11
Trbv29A0A0G2LB96 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trbv29A0A0G2LB96 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC15.73■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms