Protein–RNA interactions for Protein: A0A0G2JEM0

Trav3n-3, T cell receptor alpha variable 3D-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3n-3A0A0G2JEM0 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Trav3n-3A0A0G2JEM0 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trav3n-3A0A0G2JEM0 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav3n-3A0A0G2JEM0 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC14.39□□□□□ -0.11
Trav3n-3A0A0G2JEM0 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav3n-3A0A0G2JEM0 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav3n-3A0A0G2JEM0 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav3n-3A0A0G2JEM0 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trav3n-3A0A0G2JEM0 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav3n-3A0A0G2JEM0 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trav3n-3A0A0G2JEM0 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav3n-3A0A0G2JEM0 Gm37194-201ENSMUST00000193092 3031 ntBASIC14.39□□□□□ -0.11
Trav3n-3A0A0G2JEM0 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav3n-3A0A0G2JEM0 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav3n-3A0A0G2JEM0 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trav3n-3A0A0G2JEM0 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav3n-3A0A0G2JEM0 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC14.38□□□□□ -0.11
Trav3n-3A0A0G2JEM0 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav3n-3A0A0G2JEM0 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav3n-3A0A0G2JEM0 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav3n-3A0A0G2JEM0 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trav3n-3A0A0G2JEM0 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav3n-3A0A0G2JEM0 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav3n-3A0A0G2JEM0 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav3n-3A0A0G2JEM0 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav3n-3A0A0G2JEM0 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trav3n-3A0A0G2JEM0 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav3n-3A0A0G2JEM0 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC14.37□□□□□ -0.11
Trav3n-3A0A0G2JEM0 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav3n-3A0A0G2JEM0 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav3n-3A0A0G2JEM0 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav3n-3A0A0G2JEM0 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav3n-3A0A0G2JEM0 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav3n-3A0A0G2JEM0 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trav3n-3A0A0G2JEM0 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC14.37□□□□□ -0.11
Trav3n-3A0A0G2JEM0 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trav3n-3A0A0G2JEM0 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav3n-3A0A0G2JEM0 Gm5921-201ENSMUST00000075898 882 ntBASIC14.37□□□□□ -0.11
Trav3n-3A0A0G2JEM0 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav3n-3A0A0G2JEM0 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav3n-3A0A0G2JEM0 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trav3n-3A0A0G2JEM0 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav3n-3A0A0G2JEM0 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav3n-3A0A0G2JEM0 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav3n-3A0A0G2JEM0 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav3n-3A0A0G2JEM0 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC14.36□□□□□ -0.11
Trav3n-3A0A0G2JEM0 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Trav3n-3A0A0G2JEM0 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav3n-3A0A0G2JEM0 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav3n-3A0A0G2JEM0 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC14.36□□□□□ -0.11
Trav3n-3A0A0G2JEM0 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Trav3n-3A0A0G2JEM0 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav3n-3A0A0G2JEM0 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC14.36□□□□□ -0.11
Trav3n-3A0A0G2JEM0 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav3n-3A0A0G2JEM0 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav3n-3A0A0G2JEM0 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trav3n-3A0A0G2JEM0 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Trav3n-3A0A0G2JEM0 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav3n-3A0A0G2JEM0 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav3n-3A0A0G2JEM0 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Trav3n-3A0A0G2JEM0 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trav3n-3A0A0G2JEM0 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav3n-3A0A0G2JEM0 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC14.35□□□□□ -0.11
Trav3n-3A0A0G2JEM0 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
Trav3n-3A0A0G2JEM0 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC14.35□□□□□ -0.11
Trav3n-3A0A0G2JEM0 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC14.35□□□□□ -0.11
Trav3n-3A0A0G2JEM0 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav3n-3A0A0G2JEM0 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC14.35□□□□□ -0.11
Trav3n-3A0A0G2JEM0 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC14.35□□□□□ -0.11
Trav3n-3A0A0G2JEM0 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC14.35□□□□□ -0.11
Trav3n-3A0A0G2JEM0 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav3n-3A0A0G2JEM0 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC14.35□□□□□ -0.11
Trav3n-3A0A0G2JEM0 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav3n-3A0A0G2JEM0 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav3n-3A0A0G2JEM0 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
Trav3n-3A0A0G2JEM0 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trav3n-3A0A0G2JEM0 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trav3n-3A0A0G2JEM0 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav3n-3A0A0G2JEM0 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Trav3n-3A0A0G2JEM0 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav3n-3A0A0G2JEM0 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav3n-3A0A0G2JEM0 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav3n-3A0A0G2JEM0 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav3n-3A0A0G2JEM0 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Trav3n-3A0A0G2JEM0 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trav3n-3A0A0G2JEM0 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav3n-3A0A0G2JEM0 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Trav3n-3A0A0G2JEM0 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav3n-3A0A0G2JEM0 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trav3n-3A0A0G2JEM0 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Trav3n-3A0A0G2JEM0 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Trav3n-3A0A0G2JEM0 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav3n-3A0A0G2JEM0 Gm10232-201ENSMUST00000089221 720 ntBASIC14.34□□□□□ -0.11
Trav3n-3A0A0G2JEM0 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav3n-3A0A0G2JEM0 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav3n-3A0A0G2JEM0 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav3n-3A0A0G2JEM0 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav3n-3A0A0G2JEM0 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav3n-3A0A0G2JEM0 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav3n-3A0A0G2JEM0 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms