Protein–RNA interactions for Protein: A0A0A6YYE2

Trbv3, T cell receptor beta, variable 3 (Fragment), mousemouse

Predictions only

Length 117 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv3A0A0A6YYE2 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Trbv3A0A0A6YYE2 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Trbv3A0A0A6YYE2 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC14.7□□□□□ -0.06
Trbv3A0A0A6YYE2 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC14.7□□□□□ -0.06
Trbv3A0A0A6YYE2 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Trbv3A0A0A6YYE2 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Trbv3A0A0A6YYE2 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Trbv3A0A0A6YYE2 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trbv3A0A0A6YYE2 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trbv3A0A0A6YYE2 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trbv3A0A0A6YYE2 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trbv3A0A0A6YYE2 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trbv3A0A0A6YYE2 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trbv3A0A0A6YYE2 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trbv3A0A0A6YYE2 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
Trbv3A0A0A6YYE2 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trbv3A0A0A6YYE2 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
Trbv3A0A0A6YYE2 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trbv3A0A0A6YYE2 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Trbv3A0A0A6YYE2 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trbv3A0A0A6YYE2 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trbv3A0A0A6YYE2 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Trbv3A0A0A6YYE2 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Trbv3A0A0A6YYE2 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Trbv3A0A0A6YYE2 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC14.69□□□□□ -0.06
Trbv3A0A0A6YYE2 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trbv3A0A0A6YYE2 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC14.69□□□□□ -0.06
Trbv3A0A0A6YYE2 AC154266.1-201ENSMUST00000223190 503 ntBASIC14.69□□□□□ -0.06
Trbv3A0A0A6YYE2 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trbv3A0A0A6YYE2 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trbv3A0A0A6YYE2 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Trbv3A0A0A6YYE2 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Trbv3A0A0A6YYE2 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trbv3A0A0A6YYE2 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Trbv3A0A0A6YYE2 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trbv3A0A0A6YYE2 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trbv3A0A0A6YYE2 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trbv3A0A0A6YYE2 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Trbv3A0A0A6YYE2 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Trbv3A0A0A6YYE2 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Trbv3A0A0A6YYE2 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Trbv3A0A0A6YYE2 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trbv3A0A0A6YYE2 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC14.68□□□□□ -0.06
Trbv3A0A0A6YYE2 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Trbv3A0A0A6YYE2 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Trbv3A0A0A6YYE2 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Trbv3A0A0A6YYE2 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trbv3A0A0A6YYE2 Gm45444-201ENSMUST00000211394 898 ntBASIC14.68□□□□□ -0.06
Trbv3A0A0A6YYE2 Nsd1-203ENSMUST00000224156 1149 ntBASIC14.68□□□□□ -0.06
Trbv3A0A0A6YYE2 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Trbv3A0A0A6YYE2 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trbv3A0A0A6YYE2 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trbv3A0A0A6YYE2 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trbv3A0A0A6YYE2 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC14.68□□□□□ -0.06
Trbv3A0A0A6YYE2 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
Trbv3A0A0A6YYE2 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trbv3A0A0A6YYE2 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trbv3A0A0A6YYE2 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Trbv3A0A0A6YYE2 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Trbv3A0A0A6YYE2 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trbv3A0A0A6YYE2 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC14.67□□□□□ -0.06
Trbv3A0A0A6YYE2 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trbv3A0A0A6YYE2 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC14.67□□□□□ -0.06
Trbv3A0A0A6YYE2 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trbv3A0A0A6YYE2 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC14.67□□□□□ -0.06
Trbv3A0A0A6YYE2 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trbv3A0A0A6YYE2 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Trbv3A0A0A6YYE2 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trbv3A0A0A6YYE2 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trbv3A0A0A6YYE2 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trbv3A0A0A6YYE2 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
Trbv3A0A0A6YYE2 Gm32699-201ENSMUST00000221728 1988 ntBASIC14.67□□□□□ -0.06
Trbv3A0A0A6YYE2 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Trbv3A0A0A6YYE2 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC14.66□□□□□ -0.06
Trbv3A0A0A6YYE2 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Trbv3A0A0A6YYE2 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trbv3A0A0A6YYE2 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trbv3A0A0A6YYE2 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Trbv3A0A0A6YYE2 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC14.66□□□□□ -0.06
Trbv3A0A0A6YYE2 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trbv3A0A0A6YYE2 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Trbv3A0A0A6YYE2 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trbv3A0A0A6YYE2 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trbv3A0A0A6YYE2 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Trbv3A0A0A6YYE2 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trbv3A0A0A6YYE2 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trbv3A0A0A6YYE2 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trbv3A0A0A6YYE2 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trbv3A0A0A6YYE2 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trbv3A0A0A6YYE2 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trbv3A0A0A6YYE2 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trbv3A0A0A6YYE2 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trbv3A0A0A6YYE2 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Trbv3A0A0A6YYE2 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Trbv3A0A0A6YYE2 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trbv3A0A0A6YYE2 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC14.65□□□□□ -0.06
Trbv3A0A0A6YYE2 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC14.65□□□□□ -0.06
Trbv3A0A0A6YYE2 Gm12366-201ENSMUST00000121722 873 ntBASIC14.65□□□□□ -0.06
Trbv3A0A0A6YYE2 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC14.65□□□□□ -0.06
Trbv3A0A0A6YYE2 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC14.65□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms