Protein–RNA interactions for Protein: A0A0A6YY38

Ighv1-42, Immunoglobulin heavy variable V1-42 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-42A0A0A6YY38 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ighv1-42A0A0A6YY38 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ighv1-42A0A0A6YY38 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Ighv1-42A0A0A6YY38 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Ighv1-42A0A0A6YY38 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ighv1-42A0A0A6YY38 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
Ighv1-42A0A0A6YY38 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ighv1-42A0A0A6YY38 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Ighv1-42A0A0A6YY38 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC17.65■□□□□ 0.42
Ighv1-42A0A0A6YY38 Gm10653-202ENSMUST00000139570 835 ntBASIC17.65■□□□□ 0.42
Ighv1-42A0A0A6YY38 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC17.65■□□□□ 0.42
Ighv1-42A0A0A6YY38 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC17.65■□□□□ 0.42
Ighv1-42A0A0A6YY38 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Ighv1-42A0A0A6YY38 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Ighv1-42A0A0A6YY38 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC17.64■□□□□ 0.42
Ighv1-42A0A0A6YY38 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC17.64■□□□□ 0.41
Ighv1-42A0A0A6YY38 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Ighv1-42A0A0A6YY38 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ighv1-42A0A0A6YY38 Gm12527-201ENSMUST00000117967 564 ntBASIC17.64■□□□□ 0.41
Ighv1-42A0A0A6YY38 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC17.64■□□□□ 0.41
Ighv1-42A0A0A6YY38 Gm20760-201ENSMUST00000179197 648 ntBASIC17.64■□□□□ 0.41
Ighv1-42A0A0A6YY38 Hsf1-207ENSMUST00000228371 2102 ntBASIC17.64■□□□□ 0.41
Ighv1-42A0A0A6YY38 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Ighv1-42A0A0A6YY38 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ighv1-42A0A0A6YY38 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Ighv1-42A0A0A6YY38 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Ighv1-42A0A0A6YY38 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ighv1-42A0A0A6YY38 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ighv1-42A0A0A6YY38 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Ighv1-42A0A0A6YY38 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Ighv1-42A0A0A6YY38 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC17.63■□□□□ 0.41
Ighv1-42A0A0A6YY38 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC17.63■□□□□ 0.41
Ighv1-42A0A0A6YY38 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ighv1-42A0A0A6YY38 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC17.63■□□□□ 0.41
Ighv1-42A0A0A6YY38 AC122769.4-201ENSMUST00000228166 901 ntBASIC17.63■□□□□ 0.41
Ighv1-42A0A0A6YY38 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Ighv1-42A0A0A6YY38 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ighv1-42A0A0A6YY38 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ighv1-42A0A0A6YY38 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Ighv1-42A0A0A6YY38 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ighv1-42A0A0A6YY38 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ighv1-42A0A0A6YY38 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC17.62■□□□□ 0.41
Ighv1-42A0A0A6YY38 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ighv1-42A0A0A6YY38 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ighv1-42A0A0A6YY38 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ighv1-42A0A0A6YY38 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ighv1-42A0A0A6YY38 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ighv1-42A0A0A6YY38 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Ighv1-42A0A0A6YY38 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ighv1-42A0A0A6YY38 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Ighv1-42A0A0A6YY38 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC17.62■□□□□ 0.41
Ighv1-42A0A0A6YY38 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ighv1-42A0A0A6YY38 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ighv1-42A0A0A6YY38 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Ighv1-42A0A0A6YY38 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ighv1-42A0A0A6YY38 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ighv1-42A0A0A6YY38 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Ighv1-42A0A0A6YY38 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ighv1-42A0A0A6YY38 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ighv1-42A0A0A6YY38 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ighv1-42A0A0A6YY38 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ighv1-42A0A0A6YY38 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
Ighv1-42A0A0A6YY38 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC17.61■□□□□ 0.41
Ighv1-42A0A0A6YY38 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
Ighv1-42A0A0A6YY38 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Ighv1-42A0A0A6YY38 Gm26524-201ENSMUST00000192339 390 ntBASIC17.61■□□□□ 0.41
Ighv1-42A0A0A6YY38 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC17.61■□□□□ 0.41
Ighv1-42A0A0A6YY38 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC17.61■□□□□ 0.41
Ighv1-42A0A0A6YY38 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC17.61■□□□□ 0.41
Ighv1-42A0A0A6YY38 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ighv1-42A0A0A6YY38 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ighv1-42A0A0A6YY38 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ighv1-42A0A0A6YY38 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC17.61■□□□□ 0.41
Ighv1-42A0A0A6YY38 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Ighv1-42A0A0A6YY38 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ighv1-42A0A0A6YY38 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ighv1-42A0A0A6YY38 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ighv1-42A0A0A6YY38 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ighv1-42A0A0A6YY38 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC17.6■□□□□ 0.41
Ighv1-42A0A0A6YY38 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ighv1-42A0A0A6YY38 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ighv1-42A0A0A6YY38 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ighv1-42A0A0A6YY38 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ighv1-42A0A0A6YY38 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ighv1-42A0A0A6YY38 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC17.6■□□□□ 0.41
Ighv1-42A0A0A6YY38 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ighv1-42A0A0A6YY38 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Ighv1-42A0A0A6YY38 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ighv1-42A0A0A6YY38 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC17.6■□□□□ 0.41
Ighv1-42A0A0A6YY38 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ighv1-42A0A0A6YY38 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC17.6■□□□□ 0.41
Ighv1-42A0A0A6YY38 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ighv1-42A0A0A6YY38 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ighv1-42A0A0A6YY38 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
Ighv1-42A0A0A6YY38 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Ighv1-42A0A0A6YY38 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC17.59■□□□□ 0.41
Ighv1-42A0A0A6YY38 Gm37563-201ENSMUST00000192580 1513 ntBASIC17.59■□□□□ 0.41
Ighv1-42A0A0A6YY38 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ighv1-42A0A0A6YY38 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ighv1-42A0A0A6YY38 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms