Protein–RNA interactions for Protein: A0A0A6YW38

Gm28870, Predicted gene 28870, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28870A0A0A6YW38 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Gm28870A0A0A6YW38 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Gm28870A0A0A6YW38 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Gm28870A0A0A6YW38 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Gm28870A0A0A6YW38 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC16.46■□□□□ 0.23
Gm28870A0A0A6YW38 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC16.46■□□□□ 0.23
Gm28870A0A0A6YW38 Gm42501-201ENSMUST00000200220 1026 ntBASIC16.46■□□□□ 0.23
Gm28870A0A0A6YW38 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Gm28870A0A0A6YW38 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC16.46■□□□□ 0.22
Gm28870A0A0A6YW38 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Gm28870A0A0A6YW38 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC16.46■□□□□ 0.22
Gm28870A0A0A6YW38 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Gm28870A0A0A6YW38 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Gm28870A0A0A6YW38 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Gm28870A0A0A6YW38 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC16.45■□□□□ 0.22
Gm28870A0A0A6YW38 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Gm28870A0A0A6YW38 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Gm28870A0A0A6YW38 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Gm28870A0A0A6YW38 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC16.45■□□□□ 0.22
Gm28870A0A0A6YW38 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Gm28870A0A0A6YW38 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Gm28870A0A0A6YW38 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Gm28870A0A0A6YW38 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Gm28870A0A0A6YW38 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Gm28870A0A0A6YW38 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Gm28870A0A0A6YW38 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Gm28870A0A0A6YW38 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
Gm28870A0A0A6YW38 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Gm28870A0A0A6YW38 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Gm28870A0A0A6YW38 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Gm28870A0A0A6YW38 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC16.44■□□□□ 0.22
Gm28870A0A0A6YW38 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Gm28870A0A0A6YW38 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Gm28870A0A0A6YW38 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Gm28870A0A0A6YW38 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Gm28870A0A0A6YW38 Etf1-202ENSMUST00000180351 108 ntBASIC16.44■□□□□ 0.22
Gm28870A0A0A6YW38 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
Gm28870A0A0A6YW38 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Gm28870A0A0A6YW38 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Gm28870A0A0A6YW38 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Gm28870A0A0A6YW38 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Gm28870A0A0A6YW38 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Gm28870A0A0A6YW38 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
Gm28870A0A0A6YW38 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Gm28870A0A0A6YW38 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Gm28870A0A0A6YW38 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Gm28870A0A0A6YW38 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Gm28870A0A0A6YW38 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC16.43■□□□□ 0.22
Gm28870A0A0A6YW38 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Gm28870A0A0A6YW38 Gm7417-201ENSMUST00000192950 473 ntBASIC16.43■□□□□ 0.22
Gm28870A0A0A6YW38 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Gm28870A0A0A6YW38 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Gm28870A0A0A6YW38 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Gm28870A0A0A6YW38 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Gm28870A0A0A6YW38 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Gm28870A0A0A6YW38 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Gm28870A0A0A6YW38 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Gm28870A0A0A6YW38 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Gm28870A0A0A6YW38 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Gm28870A0A0A6YW38 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Gm28870A0A0A6YW38 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Gm28870A0A0A6YW38 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Gm28870A0A0A6YW38 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
Gm28870A0A0A6YW38 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC16.42■□□□□ 0.22
Gm28870A0A0A6YW38 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Gm28870A0A0A6YW38 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Gm28870A0A0A6YW38 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Gm28870A0A0A6YW38 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC16.42■□□□□ 0.22
Gm28870A0A0A6YW38 Hsf1-204ENSMUST00000226872 2104 ntBASIC16.42■□□□□ 0.22
Gm28870A0A0A6YW38 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC16.41■□□□□ 0.22
Gm28870A0A0A6YW38 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Gm28870A0A0A6YW38 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC16.41■□□□□ 0.22
Gm28870A0A0A6YW38 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Gm28870A0A0A6YW38 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Gm28870A0A0A6YW38 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC16.41■□□□□ 0.22
Gm28870A0A0A6YW38 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Gm28870A0A0A6YW38 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Gm28870A0A0A6YW38 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Gm28870A0A0A6YW38 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Gm28870A0A0A6YW38 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Gm28870A0A0A6YW38 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Gm28870A0A0A6YW38 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC16.4■□□□□ 0.22
Gm28870A0A0A6YW38 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Gm28870A0A0A6YW38 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Gm28870A0A0A6YW38 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Gm28870A0A0A6YW38 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC16.4■□□□□ 0.22
Gm28870A0A0A6YW38 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC16.4■□□□□ 0.22
Gm28870A0A0A6YW38 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Gm28870A0A0A6YW38 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Gm28870A0A0A6YW38 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Gm28870A0A0A6YW38 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Gm28870A0A0A6YW38 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Gm28870A0A0A6YW38 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
Gm28870A0A0A6YW38 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Gm28870A0A0A6YW38 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Gm28870A0A0A6YW38 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC16.39■□□□□ 0.21
Gm28870A0A0A6YW38 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Gm28870A0A0A6YW38 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Gm28870A0A0A6YW38 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Gm28870A0A0A6YW38 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms