Protein–RNA interactions for Protein: A0A075B6A6

Trav6n-7, T cell receptor alpha variable 6N-7 (Fragment), mousemouse

Predictions only

Length 116 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-7A0A075B6A6 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav6n-7A0A075B6A6 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC16.16■□□□□ 0.18
Trav6n-7A0A075B6A6 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
Trav6n-7A0A075B6A6 Gm7860-201ENSMUST00000121190 879 ntBASIC16.16■□□□□ 0.18
Trav6n-7A0A075B6A6 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC16.16■□□□□ 0.18
Trav6n-7A0A075B6A6 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav6n-7A0A075B6A6 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Trav6n-7A0A075B6A6 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav6n-7A0A075B6A6 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav6n-7A0A075B6A6 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav6n-7A0A075B6A6 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
Trav6n-7A0A075B6A6 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav6n-7A0A075B6A6 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Trav6n-7A0A075B6A6 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Trav6n-7A0A075B6A6 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC16.16■□□□□ 0.18
Trav6n-7A0A075B6A6 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav6n-7A0A075B6A6 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Trav6n-7A0A075B6A6 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC16.15■□□□□ 0.18
Trav6n-7A0A075B6A6 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav6n-7A0A075B6A6 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC16.15■□□□□ 0.18
Trav6n-7A0A075B6A6 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav6n-7A0A075B6A6 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Trav6n-7A0A075B6A6 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Trav6n-7A0A075B6A6 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Trav6n-7A0A075B6A6 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav6n-7A0A075B6A6 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Trav6n-7A0A075B6A6 AC099934.2-201ENSMUST00000196389 70 ntBASIC16.15■□□□□ 0.18
Trav6n-7A0A075B6A6 AC156953.1-201ENSMUST00000196953 70 ntBASIC16.15■□□□□ 0.18
Trav6n-7A0A075B6A6 AC157822.2-201ENSMUST00000200291 70 ntBASIC16.15■□□□□ 0.18
Trav6n-7A0A075B6A6 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav6n-7A0A075B6A6 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav6n-7A0A075B6A6 Gm5874-201ENSMUST00000096101 508 ntBASIC16.15■□□□□ 0.18
Trav6n-7A0A075B6A6 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav6n-7A0A075B6A6 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Trav6n-7A0A075B6A6 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC16.15■□□□□ 0.18
Trav6n-7A0A075B6A6 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trav6n-7A0A075B6A6 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC16.14■□□□□ 0.17
Trav6n-7A0A075B6A6 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trav6n-7A0A075B6A6 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC16.14■□□□□ 0.17
Trav6n-7A0A075B6A6 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trav6n-7A0A075B6A6 Reep4-203ENSMUST00000226563 1444 ntBASIC16.14■□□□□ 0.17
Trav6n-7A0A075B6A6 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Trav6n-7A0A075B6A6 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Trav6n-7A0A075B6A6 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trav6n-7A0A075B6A6 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC16.14■□□□□ 0.17
Trav6n-7A0A075B6A6 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC16.14■□□□□ 0.17
Trav6n-7A0A075B6A6 Gm42778-201ENSMUST00000199644 553 ntBASIC16.14■□□□□ 0.17
Trav6n-7A0A075B6A6 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trav6n-7A0A075B6A6 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trav6n-7A0A075B6A6 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trav6n-7A0A075B6A6 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trav6n-7A0A075B6A6 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Trav6n-7A0A075B6A6 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trav6n-7A0A075B6A6 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trav6n-7A0A075B6A6 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav6n-7A0A075B6A6 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav6n-7A0A075B6A6 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Trav6n-7A0A075B6A6 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC16.13■□□□□ 0.17
Trav6n-7A0A075B6A6 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav6n-7A0A075B6A6 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC16.13■□□□□ 0.17
Trav6n-7A0A075B6A6 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Trav6n-7A0A075B6A6 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav6n-7A0A075B6A6 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav6n-7A0A075B6A6 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav6n-7A0A075B6A6 Gm18284-201ENSMUST00000172604 624 ntBASIC16.13■□□□□ 0.17
Trav6n-7A0A075B6A6 Gm38205-201ENSMUST00000192243 258 ntBASIC16.13■□□□□ 0.17
Trav6n-7A0A075B6A6 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Trav6n-7A0A075B6A6 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Trav6n-7A0A075B6A6 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Trav6n-7A0A075B6A6 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Trav6n-7A0A075B6A6 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Trav6n-7A0A075B6A6 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Trav6n-7A0A075B6A6 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav6n-7A0A075B6A6 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Trav6n-7A0A075B6A6 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Trav6n-7A0A075B6A6 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav6n-7A0A075B6A6 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav6n-7A0A075B6A6 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Trav6n-7A0A075B6A6 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav6n-7A0A075B6A6 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC16.12■□□□□ 0.17
Trav6n-7A0A075B6A6 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Trav6n-7A0A075B6A6 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav6n-7A0A075B6A6 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav6n-7A0A075B6A6 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav6n-7A0A075B6A6 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav6n-7A0A075B6A6 Gm37352-201ENSMUST00000193908 2181 ntBASIC16.12■□□□□ 0.17
Trav6n-7A0A075B6A6 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav6n-7A0A075B6A6 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC16.12■□□□□ 0.17
Trav6n-7A0A075B6A6 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav6n-7A0A075B6A6 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Trav6n-7A0A075B6A6 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
Trav6n-7A0A075B6A6 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav6n-7A0A075B6A6 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Trav6n-7A0A075B6A6 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Trav6n-7A0A075B6A6 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav6n-7A0A075B6A6 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC16.11■□□□□ 0.17
Trav6n-7A0A075B6A6 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav6n-7A0A075B6A6 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav6n-7A0A075B6A6 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav6n-7A0A075B6A6 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms