Protein–RNA interactions for Protein: A0A075B656

Trav18, T cell receptor alpha variable 18 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav18A0A075B656 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Trav18A0A075B656 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Trav18A0A075B656 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC15.57■□□□□ 0.08
Trav18A0A075B656 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav18A0A075B656 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav18A0A075B656 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav18A0A075B656 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Trav18A0A075B656 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav18A0A075B656 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav18A0A075B656 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav18A0A075B656 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Trav18A0A075B656 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav18A0A075B656 BC021767-201ENSMUST00000126387 1716 ntBASIC15.57■□□□□ 0.08
Trav18A0A075B656 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav18A0A075B656 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Trav18A0A075B656 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav18A0A075B656 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav18A0A075B656 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav18A0A075B656 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav18A0A075B656 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC15.56■□□□□ 0.08
Trav18A0A075B656 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav18A0A075B656 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC15.56■□□□□ 0.08
Trav18A0A075B656 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav18A0A075B656 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
Trav18A0A075B656 Gm5576-201ENSMUST00000075809 1236 ntBASIC15.56■□□□□ 0.08
Trav18A0A075B656 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav18A0A075B656 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav18A0A075B656 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Trav18A0A075B656 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Trav18A0A075B656 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav18A0A075B656 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav18A0A075B656 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav18A0A075B656 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav18A0A075B656 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav18A0A075B656 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav18A0A075B656 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Trav18A0A075B656 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav18A0A075B656 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav18A0A075B656 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav18A0A075B656 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Trav18A0A075B656 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Trav18A0A075B656 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Trav18A0A075B656 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav18A0A075B656 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav18A0A075B656 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC15.55■□□□□ 0.08
Trav18A0A075B656 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav18A0A075B656 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav18A0A075B656 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Trav18A0A075B656 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav18A0A075B656 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC15.55■□□□□ 0.08
Trav18A0A075B656 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav18A0A075B656 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav18A0A075B656 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav18A0A075B656 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Trav18A0A075B656 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav18A0A075B656 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav18A0A075B656 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav18A0A075B656 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav18A0A075B656 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav18A0A075B656 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav18A0A075B656 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Trav18A0A075B656 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav18A0A075B656 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav18A0A075B656 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav18A0A075B656 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC15.54■□□□□ 0.08
Trav18A0A075B656 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav18A0A075B656 Gm9847-201ENSMUST00000052528 599 ntBASIC15.54■□□□□ 0.08
Trav18A0A075B656 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Trav18A0A075B656 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC15.54■□□□□ 0.08
Trav18A0A075B656 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
Trav18A0A075B656 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Trav18A0A075B656 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav18A0A075B656 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav18A0A075B656 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav18A0A075B656 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav18A0A075B656 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Trav18A0A075B656 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Trav18A0A075B656 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav18A0A075B656 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Trav18A0A075B656 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC15.53■□□□□ 0.08
Trav18A0A075B656 Gm43137-201ENSMUST00000198052 594 ntBASIC15.53■□□□□ 0.08
Trav18A0A075B656 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Trav18A0A075B656 Spcs1-204ENSMUST00000226782 949 ntBASIC15.53■□□□□ 0.08
Trav18A0A075B656 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav18A0A075B656 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav18A0A075B656 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Trav18A0A075B656 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC15.53■□□□□ 0.08
Trav18A0A075B656 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trav18A0A075B656 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
Trav18A0A075B656 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Trav18A0A075B656 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trav18A0A075B656 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Trav18A0A075B656 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trav18A0A075B656 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Trav18A0A075B656 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
Trav18A0A075B656 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
Trav18A0A075B656 Gm6627-201ENSMUST00000218299 2386 ntBASIC15.52■□□□□ 0.08
Trav18A0A075B656 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Trav18A0A075B656 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC15.52■□□□□ 0.08
Trav18A0A075B656 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms